RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 C11orf57Q6ZUT1 292 aaPredicted RBP20.43■□□□□ 0.86
SHANK3-203ENST00000445220 CCDC89Q8N998 374 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 ZNF594Q96JF6 807 aaPredicted RBP20.43■□□□□ 0.86
SHANK3-203ENST00000445220 USTQ9Y2C2 406 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 HEXIM1O94992 359 aaKnown RBP20.42■□□□□ 0.86
SHANK3-203ENST00000445220 ADCY8P40145 1251 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 TMCO4Q5TGY1 634 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 JDP2Q8WYK2 163 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 ABCB6Q9NP58 842 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 NOP53Q9NZM5 478 aaKnown RBP20.42■□□□□ 0.86
SHANK3-203ENST00000445220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.42■□□□□ 0.86
SHANK3-203ENST00000445220 PALM2Q8IXS6 379 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 UHMK1Q8TAS1 419 aaKnown RBP20.42■□□□□ 0.86
SHANK3-203ENST00000445220 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
SHANK3-203ENST00000445220 MYO5CQ9NQX4 1742 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 SPECC1L-ADORA2AF8WAN1 911 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 KIF1CO43896 1103 aaKnown RBP20.42■□□□□ 0.86
SHANK3-203ENST00000445220 COPB1P53618 953 aaKnown RBP20.42■□□□□ 0.86
SHANK3-203ENST00000445220 CUL4AQ13619 759 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 NELFCDQ8IXH7 590 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 ZMYND10O75800 440 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 UFL1O94874 794 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 SERPINB6P35237 376 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 CTAGE3PQ8IX95 158 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 HVCN1Q96D96 273 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 LZTS2Q9BRK4 669 aa20.42■□□□□ 0.86
SHANK3-203ENST00000445220 DCUN1D2Q6PH85 259 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 EPB41L5Q9HCM4 733 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 TXLNGQ9NUQ3 528 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 RTEL1Q9NZ71 1219 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 NR1D1P20393 614 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 DNAJC10Q8IXB1 793 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 USP44Q9H0E7 712 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 TCIRG1Q13488 830 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 GGA1Q9UJY5 639 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 BBOF1Q8ND07 529 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 DDX17Q92841 729 aaKnown RBP20.41■□□□□ 0.86
SHANK3-203ENST00000445220 ABTB1Q969K4 478 aaPredicted RBP20.41■□□□□ 0.86
SHANK3-203ENST00000445220 MYOM2P54296 1465 aa20.41■□□□□ 0.86
SHANK3-203ENST00000445220 GIPC1O14908 333 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 RIMBP2O15034 1052 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 GTPBP6O43824 516 aaPredicted RBP20.4■□□□□ 0.86
SHANK3-203ENST00000445220 PTH1RQ03431 593 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 SCYL3Q8IZE3 742 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 RNF14Q9UBS8 474 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 EXOC7Q9UPT5 735 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 CD2BP2O95400 341 aaKnown RBP20.4■□□□□ 0.86
SHANK3-203ENST00000445220 H2AFZP0C0S5 128 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 SMTNP53814 917 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 CCDC93Q567U6 631 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 H2AFVQ71UI9 128 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 SPATA5Q8NB90 893 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 PASKQ96RG2 1323 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 EHHADHQ08426 723 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 DPCR1Q3MIW9 517 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 WHAMMQ8TF30 809 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 PCDHA5Q9Y5H7 936 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 DNAJC8O75937 253 aaPredicted RBP20.4■□□□□ 0.86
SHANK3-203ENST00000445220 ABCB4P21439 1286 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 NBPF9Q3BBW0 867 aa20.4■□□□□ 0.86
SHANK3-203ENST00000445220 MORC2Q9Y6X9 1032 aaPredicted RBP20.4■□□□□ 0.86
SHANK3-203ENST00000445220 EXOC3O60645 756 aa20.39■□□□□ 0.86
SHANK3-203ENST00000445220 FAM133BQ5BKY9 247 aaKnown RBP20.39■□□□□ 0.86
SHANK3-203ENST00000445220 SYNMO15061 1565 aa20.39■□□□□ 0.85
SHANK3-203ENST00000445220 XAB2Q9HCS7 855 aaKnown RBP20.39■□□□□ 0.85
SHANK3-203ENST00000445220 IL17REQ8NFR9 667 aa20.39■□□□□ 0.85
SHANK3-203ENST00000445220 CLASP1Q7Z460 1538 aa20.39■□□□□ 0.85
SHANK3-203ENST00000445220 LTKP29376 864 aa20.39■□□□□ 0.85
SHANK3-203ENST00000445220 MORC4Q8TE76 937 aa20.39■□□□□ 0.85
SHANK3-203ENST00000445220 NLRP7Q8WX94 980 aa20.39■□□□□ 0.85
SHANK3-203ENST00000445220 TBC1D7Q9P0N9 293 aa20.39■□□□□ 0.85
SHANK3-203ENST00000445220 ARHGAP4P98171 946 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 FNBP4Q8N3X1 1017 aaPredicted RBP20.38■□□□□ 0.85
SHANK3-203ENST00000445220 ZBTB21Q9ULJ3 1066 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 RNF8O76064 485 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 PDCD7Q8N8D1 485 aaKnown RBP20.38■□□□□ 0.85
SHANK3-203ENST00000445220 DNM3Q9UQ16 869 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 SART1O43290 800 aaKnown RBP20.38■□□□□ 0.85
SHANK3-203ENST00000445220 RBL2Q08999 1139 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 HMGB1P1B2RPK0 211 aaPredicted RBP20.38■□□□□ 0.85
SHANK3-203ENST00000445220 TRIM37O94972 964 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 XRCC5P13010 732 aaKnown RBP20.38■□□□□ 0.85
SHANK3-203ENST00000445220 ZAP70P43403 619 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 GOLGA8FQ08AF8 430 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 GOLGA8DPQ0D2H9 430 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 TRMT2AQ8IZ69 625 aaKnown RBP20.38■□□□□ 0.85
SHANK3-203ENST00000445220 VPS54Q9P1Q0 977 aa20.38■□□□□ 0.85
SHANK3-203ENST00000445220 ATP7BP35670 1465 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 ARHGAP44Q17R89 818 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 CASC4Q6P4E1 433 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 ANKRD13CQ8N6S4 541 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 SPZ1Q9BXG8 430 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 ZNF532Q9HCE3 1301 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 MAP3K7O43318 606 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 CALCRLQ16602 461 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 CC2D1AQ6P1N0 951 aaPredicted RBP20.37■□□□□ 0.85
SHANK3-203ENST00000445220 MYOCDQ8IZQ8 938 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 GYS2P54840 703 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 VSTM4Q8IW00 320 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 TUBB6Q9BUF5 446 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms