RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 CHST13Q8NET6 341 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 MYLIPQ8WY64 445 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 AGBL1Q96MI9 1066 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 TOX2Q96NM4 488 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 HOMER2Q9NSB8 354 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 DDX49Q9Y6V7 483 aaKnown RBP16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 TTC41PQ6P2S7 1318 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 UNC80Q8N2C7 3258 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 MOXD2PA6NHM9 499 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 ASGR1P07306 291 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 C6orf222P0C671 652 aaPredicted RBP16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 PTGS1P23219 599 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 OAZ1P54368 228 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 SNAP25P60880 206 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 FPGSQ05932 587 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 C16orf59Q7L2K0 433 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 ABHD16BQ9H3Z7 469 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 ZNF287Q9HBT7 754 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 TBX21Q9UL17 535 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 CTDP1Q9Y5B0 961 aaPredicted RBP16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 PLIN4Q96Q06 1357 aa16.87■□□□□ 0.29
SMARCAL1-210ENST00000445153 MCM3APO60318 1980 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 SOWAHBA6NEL2 793 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 DCDC2CA8MYV0 355 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 NMT2O60551 498 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 MCCP23508 829 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 CST5P28325 142 aaPredicted RBP16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 RRP1P56182 461 aaKnown RBP16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 GJA9P57773 515 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 CTDSPL2Q05D32 466 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 FAM133AQ8N9E0 248 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 FSD1Q9BTV5 496 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 NAPBQ9H115 298 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 UPF3AQ9H1J1 476 aaKnown RBP16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 FBXO40Q9UH90 709 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 ASTN1O14525 1302 aa16.86■□□□□ 0.29
SMARCAL1-210ENST00000445153 TIMP1P01033 207 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 PDE4BQ07343 736 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 TMEM63BQ5T3F8 832 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 VPS53Q5VIR6 699 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 MAFAQ8NHW3 353 aaPredicted RBP16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 STAG1Q8WVM7 1258 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 GMCL1Q96IK5 515 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 NACAP1Q9BZK3 213 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 A1CFQ9NQ94 594 aaKnown RBP16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 ELP1O95163 1332 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 SALL3Q9BXA9 1300 aa16.85■□□□□ 0.29
SMARCAL1-210ENST00000445153 ERC2O15083 957 aa16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 STAT2P52630 851 aa16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 BEX3Q00994 111 aa16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 GNASQ5JWF2 1037 aa16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 KCTD1Q719H9 257 aa16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 GLT1D1Q96MS3 346 aa16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 PURBQ96QR8 312 aaKnown RBP16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 RNF146Q9NTX7 359 aa16.84■□□□□ 0.29
SMARCAL1-210ENST00000445153 EYSQ5T1H1 3165 aa16.83■□□□□ 0.29
SMARCAL1-210ENST00000445153 ARVCFO00192 962 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 MX1P20591 662 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 SLC1A4P43007 532 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 NKX3-2P78367 333 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 GRIN2CQ14957 1233 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 LRRFIP1Q32MZ4 808 aaKnown RBP16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 MUM1L1Q5H9M0 696 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 RCSD1Q6JBY9 416 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 MFSD5Q6N075 450 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 PCSK9Q8NBP7 692 aaKnown RBP16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 CDH23Q9H251 3354 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 ACAD9Q9H845 621 aa16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
SMARCAL1-210ENST00000445153 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 GRXCR1A8MXD5 290 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 FDX1P10109 184 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 ALAS1P13196 640 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 CSF2RAP15509 400 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 TNFAIP2Q03169 654 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 CCDC174Q6PII3 467 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 FAM126BQ8IXS8 530 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 CHURC1Q8WUH1 139 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 VTI1AQ96AJ9 217 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 TRERF1Q96PN7 1200 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 PDGFCQ9NRA1 345 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 PRR12Q9ULL5 1215 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 STX8Q9UNK0 236 aa16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 GNEQ9Y223 722 aaKnown RBP16.82■□□□□ 0.28
SMARCAL1-210ENST00000445153 GRIN2DO15399 1336 aa16.81■□□□□ 0.28
SMARCAL1-210ENST00000445153 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
SMARCAL1-210ENST00000445153 PLA2G6O60733 806 aa16.81■□□□□ 0.28
SMARCAL1-210ENST00000445153 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms