RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 SSRP1Q08945 709 aaKnown RBP10.15□□□□□ -0.78
FXR1-203ENST00000445140 STAG2Q8N3U4 1231 aa10.15□□□□□ -0.78
FXR1-203ENST00000445140 CCDC12Q8WUD4 166 aaPredicted RBP10.15□□□□□ -0.78
FXR1-203ENST00000445140 RRP36Q96EU6 259 aaKnown RBP10.15□□□□□ -0.78
FXR1-203ENST00000445140 IPO9Q96P70 1041 aaKnown RBP10.15□□□□□ -0.78
FXR1-203ENST00000445140 PARK7Q99497 189 aaKnown RBP10.15□□□□□ -0.78
FXR1-203ENST00000445140 SPDYE16A6NNV3 312 aaPredicted RBP10.14□□□□□ -0.79
FXR1-203ENST00000445140 PIK3CDO00329 1044 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 CPLX1O14810 134 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 PLEKHA8P1O95397 391 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 ZNF157P51786 506 aaPredicted RBP10.14□□□□□ -0.79
FXR1-203ENST00000445140 OTUD7BQ6GQQ9 843 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 ADGRF4Q8IZF3 695 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 CCDC148Q8NFR7 591 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 BARHL2Q9NY43 387 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 RABGAP1Q9Y3P9 1069 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 GOLGB1Q14789 3259 aaKnown RBP10.14□□□□□ -0.79
FXR1-203ENST00000445140 CCL15-CCL14A0A0B4J2E2 113 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 TRIM75PA6NK02 468 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 VWA5AO00534 786 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 SCG2P13521 617 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 ADD1P35611 737 aaKnown RBP10.14□□□□□ -0.79
FXR1-203ENST00000445140 CCL15Q16663 113 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 CCDC96Q2M329 555 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 DEFB115Q30KQ5 88 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 CCDC83Q8IWF9 413 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 ZNF408Q9H9D4 720 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 FZD1Q9UP38 647 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 MTMR7Q9Y216 660 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 ZNF536O15090 1300 aa10.14□□□□□ -0.79
FXR1-203ENST00000445140 TMEM232C9JQI7 657 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 STK25O00506 426 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 HSPA6P17066 643 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 IRF5Q13568 498 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 RIOX2Q8IUF8 465 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 NUP133Q8WUM0 1156 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.13□□□□□ -0.79
FXR1-203ENST00000445140 ZNF214Q9UL59 606 aaPredicted RBP10.13□□□□□ -0.79
FXR1-203ENST00000445140 BTBD19C9JJ37 291 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 SLC25A27O95847 323 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 CALML3P27482 149 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 ORC2Q13416 577 aaPredicted RBP10.13□□□□□ -0.79
FXR1-203ENST00000445140 CDC37Q16543 378 aaPredicted RBP10.13□□□□□ -0.79
FXR1-203ENST00000445140 IFNL1Q8IU54 200 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 ABRAQ8N0Z2 381 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 CHST13Q8NET6 341 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 MYL10Q9BUA6 226 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 AMNQ9BXJ7 453 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 ZMYND12Q9H0C1 365 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 ASCC2Q9H1I8 757 aaPredicted RBP10.13□□□□□ -0.79
FXR1-203ENST00000445140 PLXNA1Q9UIW2 1896 aa10.13□□□□□ -0.79
FXR1-203ENST00000445140 STXBP3O00186 592 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 ZBED4O75132 1171 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 CNMDO75829 334 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 XBP1P17861 261 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 PRKG1Q13976 671 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 TREML2Q5T2D2 321 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 CAPNS2Q96L46 248 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 PHF20Q9BVI0 1012 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 SEC63Q9UGP8 760 aaKnown RBP10.12□□□□□ -0.79
FXR1-203ENST00000445140 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 SMC3Q9UQE7 1217 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 M0R2N6 131 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 BCRP11274 1271 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 HERVK_113P62684 666 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 ATP2B2Q01814 1243 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 FAM110CQ1W6H9 321 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 QRICH1Q2TAL8 776 aa10.12□□□□□ -0.79
FXR1-203ENST00000445140 CCDC84Q86UT8 332 aaPredicted RBP10.12□□□□□ -0.79
FXR1-203ENST00000445140 NCOA5Q9HCD5 579 aaKnown RBP10.12□□□□□ -0.79
FXR1-203ENST00000445140 ORC3Q9UBD5 711 aaPredicted RBP10.12□□□□□ -0.79
FXR1-203ENST00000445140 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 C1QTNF8P60827 252 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 CCT2P78371 535 aaKnown RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 AKAP17AQ02040 695 aaKnown RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 TTBK2Q6IQ55 1244 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 KCTD1Q719H9 257 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 NECAB1Q8N987 351 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 BICD2Q8TD16 824 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 PTPN18Q99952 460 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 TEX13BQ9BXU2 312 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 ABT1Q9ULW3 272 aaKnown RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 FRMPD2Q68DX3 1309 aaPredicted RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 WDR33Q9C0J8 1336 aaKnown RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 PDHXO00330 501 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 CA12O43570 354 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 FLOT1O75955 427 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 IRX3P78415 501 aaPredicted RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 GADL1Q6ZQY3 521 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 FBXO11Q86XK2 927 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 FBXO18Q8NFZ0 1043 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 MROH8Q9H579 483 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 RIC8AQ9NPQ8 531 aa10.11□□□□□ -0.79
FXR1-203ENST00000445140 MRPL11Q9Y3B7 192 aaKnown RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 ZNFX1Q9P2E3 1918 aaKnown RBP10.11□□□□□ -0.79
FXR1-203ENST00000445140 PPP1R11O60927 126 aaPredicted RBP10.1□□□□□ -0.79
FXR1-203ENST00000445140 GJB2P29033 226 aa10.1□□□□□ -0.79
FXR1-203ENST00000445140 HSD17B4P51659 736 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms