RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ADAM9Q13443 819 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 PEX26Q7Z412 305 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.84□□□□□ -0.99
RIF1-205ENST00000444746 NLRX1Q86UT6 975 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 DEPTORQ8TB45 409 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 VPS37BQ9H9H4 285 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 OGFRQ9NZT2 677 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 MED23Q9ULK4 1368 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 MARK3P27448 753 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 LRRC8AQ8IWT6 810 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 ANKRD35Q8N283 1001 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 TTLL11Q8NHH1 800 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 AFAP1L1Q8TED9 768 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 CELF1Q92879 486 aaKnown RBP8.84□□□□□ -0.99
RIF1-205ENST00000444746 CCDC77Q9BR77 488 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 PLVAPQ9BX97 442 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 FAM204AQ9H8W3 233 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 LRRIQ4A6NIV6 560 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 FERP16591 822 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 TBC1D9BQ66K14 1250 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 ZNF365Q70YC5 407 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 USP6P35125 1406 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 IFNB1P01574 187 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 PRR29P0C7W0 189 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 PDE6BP35913 854 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 MED10Q9BTT4 135 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 SPTLC3Q9NUV7 552 aa8.84□□□□□ -0.99
RIF1-205ENST00000444746 FOXN1O15353 648 aa8.84□□□□□ -1
RIF1-205ENST00000444746 SAT1P21673 171 aa8.84□□□□□ -1
RIF1-205ENST00000444746 BRINP3Q76B58 766 aa8.84□□□□□ -1
RIF1-205ENST00000444746 GOLPH3LQ9H4A5 285 aa8.84□□□□□ -1
RIF1-205ENST00000444746 ATG3Q9NT62 314 aa8.84□□□□□ -1
RIF1-205ENST00000444746 DNAJC17Q9NVM6 304 aaKnown RBP8.84□□□□□ -1
RIF1-205ENST00000444746 MTUS1Q9ULD2 1270 aa8.84□□□□□ -1
RIF1-205ENST00000444746 ERBB3P21860 1342 aa8.83□□□□□ -1
RIF1-205ENST00000444746 PABPN1LA6NDY0 278 aaKnown RBP8.83□□□□□ -1
RIF1-205ENST00000444746 FMNL1O95466 1100 aaPredicted RBP8.83□□□□□ -1
RIF1-205ENST00000444746 CMA1P23946 247 aa8.83□□□□□ -1
RIF1-205ENST00000444746 C2orf54Q08AI8 447 aa8.83□□□□□ -1
RIF1-205ENST00000444746 TRAF1Q13077 416 aa8.83□□□□□ -1
RIF1-205ENST00000444746 SMAD1Q15797 465 aaKnown RBP8.83□□□□□ -1
RIF1-205ENST00000444746 SPOUT1Q5T280 376 aaKnown RBP8.83□□□□□ -1
RIF1-205ENST00000444746 SH2B2O14492 632 aaPredicted RBP8.83□□□□□ -1
RIF1-205ENST00000444746 LRRN2O75325 713 aa8.83□□□□□ -1
RIF1-205ENST00000444746 RPS6KA1Q15418 735 aa8.83□□□□□ -1
RIF1-205ENST00000444746 TRIP13Q15645 432 aaPredicted RBP8.83□□□□□ -1
RIF1-205ENST00000444746 KCTD16Q68DU8 428 aa8.83□□□□□ -1
RIF1-205ENST00000444746 TSGA10Q9BZW7 698 aa8.83□□□□□ -1
RIF1-205ENST00000444746 MTRF1LQ9UGC7 380 aaKnown RBP8.83□□□□□ -1
RIF1-205ENST00000444746 STAP2Q9UGK3 403 aa8.83□□□□□ -1
RIF1-205ENST00000444746 TRIM49BA6NDI0 452 aa8.83□□□□□ -1
RIF1-205ENST00000444746 PP2D1A8MPX8 630 aa8.83□□□□□ -1
RIF1-205ENST00000444746 H7C1D1 291 aa8.83□□□□□ -1
RIF1-205ENST00000444746 MOCS3O95396 460 aa8.83□□□□□ -1
RIF1-205ENST00000444746 FTCDO95954 541 aa8.83□□□□□ -1
RIF1-205ENST00000444746 ATL3Q6DD88 541 aa8.83□□□□□ -1
RIF1-205ENST00000444746 FMNL3Q8IVF7 1028 aa8.83□□□□□ -1
RIF1-205ENST00000444746 MYRIPQ8NFW9 859 aa8.83□□□□□ -1
RIF1-205ENST00000444746 KIFAP3Q92845 792 aa8.83□□□□□ -1
RIF1-205ENST00000444746 CNOT6LQ96LI5 555 aaKnown RBP8.83□□□□□ -1
RIF1-205ENST00000444746 FERMT1Q9BQL6 677 aa8.83□□□□□ -1
RIF1-205ENST00000444746 PRDM15P57071 1507 aaPredicted RBP8.83□□□□□ -1
RIF1-205ENST00000444746 RGS12O14924 1447 aa8.83□□□□□ -1
RIF1-205ENST00000444746 TOB2Q14106 344 aaPredicted RBP8.83□□□□□ -1
RIF1-205ENST00000444746 SLC35F6Q8N357 371 aa8.83□□□□□ -1
RIF1-205ENST00000444746 PRPF38AQ8NAV1 312 aaKnown RBP8.83□□□□□ -1
RIF1-205ENST00000444746 TXNDC16Q9P2K2 825 aa8.83□□□□□ -1
RIF1-205ENST00000444746 SEPT9Q9UHD8 586 aaPredicted RBP8.83□□□□□ -1
RIF1-205ENST00000444746 TBC1D8O95759 1140 aa8.83□□□□□ -1
RIF1-205ENST00000444746 LIG4P49917 911 aa8.83□□□□□ -1
RIF1-205ENST00000444746 EPC1Q9H2F5 836 aa8.83□□□□□ -1
RIF1-205ENST00000444746 SAMD9LQ8IVG5 1584 aa8.83□□□□□ -1
RIF1-205ENST00000444746 GYS2P54840 703 aa8.83□□□□□ -1
RIF1-205ENST00000444746 PSMD6Q15008 389 aa8.83□□□□□ -1
RIF1-205ENST00000444746 GEN1Q17RS7 908 aa8.83□□□□□ -1
RIF1-205ENST00000444746 CACTINQ8WUQ7 758 aaKnown RBP8.83□□□□□ -1
RIF1-205ENST00000444746 ATP8A2Q9NTI2 1148 aa8.83□□□□□ -1
RIF1-205ENST00000444746 UTP11Q9Y3A2 253 aaKnown RBP8.83□□□□□ -1
RIF1-205ENST00000444746 ARMCX5Q6P1M9 558 aa8.82□□□□□ -1
RIF1-205ENST00000444746 SEPT12Q8IYM1 358 aa8.82□□□□□ -1
RIF1-205ENST00000444746 CYP2E1P05181 493 aaPredicted RBP8.82□□□□□ -1
RIF1-205ENST00000444746 ATF7P17544 494 aaPredicted RBP8.82□□□□□ -1
RIF1-205ENST00000444746 COPB1P53618 953 aaKnown RBP8.82□□□□□ -1
RIF1-205ENST00000444746 EHHADHQ08426 723 aa8.82□□□□□ -1
RIF1-205ENST00000444746 FBXO18Q8NFZ0 1043 aa8.82□□□□□ -1
RIF1-205ENST00000444746 SSX2IPQ9Y2D8 614 aa8.82□□□□□ -1
RIF1-205ENST00000444746 NPHP4O75161 1426 aaPredicted RBP8.82□□□□□ -1
RIF1-205ENST00000444746 USP17L5A8MUK1 530 aa8.82□□□□□ -1
RIF1-205ENST00000444746 PRPHP41219 470 aa8.82□□□□□ -1
RIF1-205ENST00000444746 YARSP54577 528 aaKnown RBP8.82□□□□□ -1
RIF1-205ENST00000444746 CLEC10AQ8IUN9 316 aa8.82□□□□□ -1
RIF1-205ENST00000444746 CCDC26Q8TAB7 109 aa8.82□□□□□ -1
RIF1-205ENST00000444746 NAP1L4Q99733 375 aaKnown RBP8.82□□□□□ -1
RIF1-205ENST00000444746 WDR17Q8IZU2 1322 aa8.82□□□□□ -1
RIF1-205ENST00000444746 GOLGA6CA6NDK9 693 aa8.82□□□□□ -1
RIF1-205ENST00000444746 GOLGA6DP0CG33 693 aa8.82□□□□□ -1
RIF1-205ENST00000444746 BAG6P46379 1132 aa8.82□□□□□ -1
RIF1-205ENST00000444746 SCARA5Q6ZMJ2 495 aa8.82□□□□□ -1
RIF1-205ENST00000444746 TMTC1Q8IUR5 882 aa8.82□□□□□ -1
RIF1-205ENST00000444746 ZNF653Q96CK0 615 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms