RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 SLC4A3P48751 1232 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 MFAP1P55081 439 aaKnown RBP19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 TLE2Q04725 743 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 IKQ13123 557 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 CCDC129Q6ZRS4 1044 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 ANKRD33Q7Z3H0 272 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 RWDD1Q9H446 243 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 PRDM5Q9NQX1 630 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 IL17RBQ9NRM6 502 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 MTMR10Q9NXD2 777 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 ZHX1Q9UKY1 873 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 PNMA2Q9UL42 364 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 STXBP5LQ9Y2K9 1186 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 ELP1O95163 1332 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 SYNRGQ9UMZ2 1314 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 POTEB2H3BUK9 544 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 RANBP6O60518 1105 aaKnown RBP19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 CLTBP09497 229 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 ACLYP53396 1101 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 NKX3-2P78367 333 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 CTDSPL2Q05D32 466 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 CCSAPQ6IQ19 270 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 ARMCX2Q7L311 632 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 FAM133AQ8N9E0 248 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 DCAF4Q8WV16 495 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 UPF3AQ9H1J1 476 aaKnown RBP19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 STARD7Q9NQZ5 370 aa19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 ISY1Q9ULR0 285 aaKnown RBP19.29■□□□□ 0.68
CTDSP1-204ENST00000443891 ZNF536O15090 1300 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 MROH7Q68CQ1 1323 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 DCDC2CA8MYV0 355 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 KIAA0355O15063 1070 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 FGAP02671 866 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 GJA9P57773 515 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 VPS53Q5VIR6 699 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 SMC5Q8IY18 1101 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 FGD4Q96M96 766 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 GLT1D1Q96MS3 346 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 TTC14Q96N46 770 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
CTDSP1-204ENST00000443891 LOC102724159A0A0B4J2E5 919 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 TRIM43BA6NCK2 446 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 HSPD1P10809 573 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 TOP1P11387 765 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 PWP2Q15269 919 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 CCDC144BQ3MJ40 725 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 BTNL9Q6UXG8 535 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 BADQ92934 168 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 TRIM43Q96BQ3 446 aaPredicted RBP19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 TRERF1Q96PN7 1200 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 SEZ6LQ9BYH1 1024 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 OSBPL3Q9H4L5 887 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 A1CFQ9NQ94 594 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 PRR12Q9ULL5 1215 aa19.27■□□□□ 0.68
CTDSP1-204ENST00000443891 SMCHD1A6NHR9 2005 aa19.27■□□□□ 0.67
CTDSP1-204ENST00000443891 KCNA10Q16322 511 aa19.26■□□□□ 0.67
CTDSP1-204ENST00000443891 KCTD1Q719H9 257 aa19.26■□□□□ 0.67
CTDSP1-204ENST00000443891 CCDC144CPQ8IYA2 1237 aa19.26■□□□□ 0.67
CTDSP1-204ENST00000443891 SLC17A8Q8NDX2 589 aa19.26■□□□□ 0.67
CTDSP1-204ENST00000443891 AGBL1Q96MI9 1066 aa19.26■□□□□ 0.67
CTDSP1-204ENST00000443891 RNF41Q9H4P4 317 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-204ENST00000443891 HOMER2Q9NSB8 354 aa19.26■□□□□ 0.67
CTDSP1-204ENST00000443891 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 LTBP2Q14767 1821 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 A0A0D9SFI3 127 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 ICAM1P05362 532 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 C6orf222P0C671 652 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 RAG1P15918 1043 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 SH3RF1Q7Z6J0 888 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 KATNBL1Q9H079 304 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 TMEM39AQ9NV64 488 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 Q9Y3F1 56 aa19.25■□□□□ 0.67
CTDSP1-204ENST00000443891 TRIM6-TRIM34B2RNG4 842 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 NMT2O60551 498 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 CABYRO75952 493 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 ALAS1P13196 640 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 SMAD3P84022 425 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 SHHQ15465 462 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 Q7L0L9 218 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 LENG1Q96BZ8 264 aaPredicted RBP19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 LNPKQ9C0E8 428 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 RANBP17Q9H2T7 1088 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 INCENPQ9NQS7 918 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 TOMM22Q9NS69 142 aa19.24■□□□□ 0.67
CTDSP1-204ENST00000443891 DNAH12Q6ZR08 3092 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 A0A0U1RQG5 324 aaPredicted RBP19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 HIP1O00291 1037 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 PQBP1O60828 265 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 ASGR1P07306 291 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 CDK7P50613 346 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 CNTN2Q02246 1040 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 FAAP100Q0VG06 881 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 NMIQ13287 307 aaPredicted RBP19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 CCDC96Q2M329 555 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 CCDC178Q5BJE1 867 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 GNASQ5JWF2 1037 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 AKNAD1Q5T1N1 836 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 ZNF697Q5TEC3 545 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 IQSEC1Q6DN90 963 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms