RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SERPINB13Q9UIV8 391 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 NDUFB9Q9Y6M9 179 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 HEG1Q9ULI3 1381 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 FAM81BQ96LP2 452 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 GNAT1P11488 350 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 IFT20Q8IY31 132 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 PARP2Q9UGN5 583 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 TRPM1Q7Z4N2 1603 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 ABCC3O15438 1527 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 PALLDQ8WX93 1383 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 CPA1P15085 419 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 NOLC1Q14978 699 aaKnown RBP eCLIP12.35□□□□□ -0.436e-51■□□□□ 11.3
FN1-211ENST00000443816 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
FN1-211ENST00000443816 COA1Q9GZY4 146 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 SAMD15Q9P1V8 674 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 OVOS2A0A0G2JMS6 1433 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 ZNF233A6NK53 670 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 MAP7Q14244 749 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 AOC3Q16853 763 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 FANCBQ8NB91 859 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 MAGEF1Q9HAY2 307 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 PER1O15534 1290 aaPredicted RBP12.35□□□□□ -0.43
FN1-211ENST00000443816 PDE6CP51160 858 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 SESTD1Q86VW0 696 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 SLC7A3Q8WY07 619 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 NAPGQ99747 312 aaPredicted RBP12.35□□□□□ -0.43
FN1-211ENST00000443816 ATG3Q9NT62 314 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 FER1L4A9Z1Z3 1794 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 CBX1P83916 185 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 CLEC4GQ6UXB4 293 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 SOS2Q07890 1332 aaPredicted RBP12.35□□□□□ -0.43
FN1-211ENST00000443816 SPDYE16A6NNV3 312 aaPredicted RBP12.35□□□□□ -0.43
FN1-211ENST00000443816 SORBS3O60504 671 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 NELFCDQ8IXH7 590 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 ASIC3Q9UHC3 531 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 NCAPD2Q15021 1401 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 TLDC2A0PJX2 215 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 ARMCX5Q6P1M9 558 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 GIMAP8Q8ND71 665 aaPredicted RBP12.35□□□□□ -0.43
FN1-211ENST00000443816 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
FN1-211ENST00000443816 PRPSAP1Q14558 356 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 GBP6Q6ZN66 633 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
FN1-211ENST00000443816 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
FN1-211ENST00000443816 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 TNKSO95271 1327 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 MMP10P09238 476 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 ARHGAP44Q17R89 818 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 PEX26Q7Z412 305 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 METP08581 1390 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 RINT1Q6NUQ1 792 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 ZNF449Q6P9G9 518 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 COA7Q96BR5 231 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 METTL14Q9HCE5 456 aaKnown RBP12.34□□□□□ -0.43
FN1-211ENST00000443816 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.34□□□□□ -0.438e-28■■■□□ 14.7
FN1-211ENST00000443816 ARHGAP31Q2M1Z3 1444 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 BMP3P12645 472 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 LACTBP83111 547 aaPredicted RBP12.34□□□□□ -0.43
FN1-211ENST00000443816 NOSTRINQ8IVI9 506 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 WDR11Q9BZH6 1224 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 PLCB1Q9NQ66 1216 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 MYO1AQ9UBC5 1043 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 TNNQ9UQP3 1299 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 ZC3H13Q5T200 1668 aaKnown RBP12.34□□□□□ -0.43
FN1-211ENST00000443816 HSPA1LP34931 641 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 FAM160B2Q86V87 743 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 TICAM2Q86XR7 235 aa12.34□□□□□ -0.43
FN1-211ENST00000443816 FGAP02671 866 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 HSPD1P10809 573 aaKnown RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 C8orf74Q6P047 294 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 EPSTI1Q96J88 318 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 RIMS1Q86UR5 1692 aaKnown RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 NT5C2P49902 561 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 ITKQ08881 620 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 GRAPQ13588 217 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 GRAPLQ8TC17 118 aaPredicted RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 NLRP7Q8WX94 980 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 GPR108Q9NPR9 543 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 IFRD2Q12894 506 aaPredicted RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 NLRP10Q86W26 655 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 NACC1Q96RE7 527 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 SLC8A2Q9UPR5 921 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 DLATP10515 647 aaKnown RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 ADRA2BP18089 450 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 LONP1P36776 959 aaKnown RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 BBS5Q8N3I7 341 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 SECISBP2LQ93073 1101 aaKnown RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms