RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ARHGAP27Q6ZUM4 889 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 KRT26Q7Z3Y9 468 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 NEK8Q86SG6 692 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 GAS2L3Q86XJ1 694 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 MCF2L2Q86YR7 1114 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 SIAH1Q8IUQ4 282 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 DHX37Q8IY37 1157 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 SLFN12Q8IYM2 578 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 ADGRF4Q8IZF3 695 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 STK11IPQ8N1F8 1099 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 STAG2Q8N3U4 1231 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 C4orf32Q8N8J7 132 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 PRPF38AQ8NAV1 312 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 CNNM3Q8NE01 707 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 NKX2-3Q8TAU0 364 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 TMEM174Q8WUU8 243 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 CRYGNQ8WXF5 182 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC47Q96A33 483 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 TRIM44Q96DX7 344 aaPredicted RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 IQCDQ96DY2 449 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 DYNLL2Q96FJ2 89 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 L3MBTL3Q96JM7 780 aaPredicted RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 CTAGE1Q96RT6 745 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 RANBP17Q9H2T7 1088 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 TDRD3Q9H7E2 651 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 DNAJC18Q9H819 358 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 EHMT1Q9H9B1 1298 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 JMJD4Q9H9V9 463 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.21□□□□□ -1.93e-6■■■■■ 29.3
LINC00393-201ENST00000443621 AS3MTQ9HBK9 375 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 INCENPQ9NQS7 918 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 KCNQ5Q9NR82 932 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 KCND1Q9NSA2 647 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 KCND2Q9NZV8 630 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 VPS54Q9P1Q0 977 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 CLIP2Q9UDT6 1046 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 KCNG1Q9UIX4 513 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 FEM1BQ9UK73 627 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 ATF5Q9Y2D1 282 aaPredicted RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 MRPL11Q9Y3B7 192 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 CLIC4Q9Y696 253 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 CNTNAP1P78357 1384 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 ATAD5Q96QE3 1844 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 ABCB11O95342 1321 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 KDM3AQ9Y4C1 1321 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 DOCK1Q14185 1865 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 PVALEFA0A1B0GWK0 134 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L5A8MUK1 530 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 PHF20L1A8MW92 1017 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 BECN2A8MW95 431 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L10C9JJH3 530 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GOLGA6L19H0YKK7 550 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 CBFA2T2O43439 604 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GTPBP6O43824 516 aaPredicted RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 NRDCO43847 1150 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GRIN3BO60391 1043 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 NMT2O60551 498 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 HOXC6P09630 235 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 OR52Z1P0C646 297 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 PFKFB1P16118 471 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 RXRAP19793 462 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 COPB2P35606 906 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 SREBF1P36956 1147 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 UBA7P41226 1012 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 SCNN1DP51172 638 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 ADCY7P51828 1080 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 NDUFA8P51970 172 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GSDMDP57764 484 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 SPAG1Q07617 926 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 NR5A1Q13285 461 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 PICALMQ13492 652 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 IRF5Q13568 498 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 IQCB1Q15051 598 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 POSTNQ15063 836 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 E2F4Q16254 413 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC96Q2M329 555 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 TMEM266Q2M3C6 531 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 TKFCQ3LXA3 575 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 SH3D19Q5HYK7 790 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 SYDE2Q5VT97 1194 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 SLFN13Q68D06 897 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 WWC2Q6AWC2 1192 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 DPY19L2Q6NUT2 758 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 FAM173BQ6P4H8 233 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L2Q6R6M4 530 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 OLFM4Q6UX06 510 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 LBX2Q6XYB7 198 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 USP50Q70EL3 339 aaPredicted RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 SH3BP5LQ7L8J4 393 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 FBXO11Q86XK2 927 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 ZSCAN29Q8IWY8 852 aaPredicted RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC144CPQ8IYA2 1237 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 FAM43AQ8N2R8 423 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 MB21D1Q8N884 522 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 RDM1Q8NG50 284 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 ENOX1Q8TC92 643 aaKnown RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 NEK9Q8TD19 979 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 NOC3LQ8WTT2 800 aaKnown RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GTF3C2Q8WUA4 911 aaPredicted RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 UBE2Q2Q8WVN8 375 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms