RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MYL10Q9BUA6 226 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 HOMER3Q9NSC5 361 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 RBM12Q9NTZ6 932 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 WDR19Q8NEZ3 1342 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SUN1O94901 812 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 HEXIM1O94992 359 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 DPYDQ12882 1025 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 TEX9Q8N6V9 391 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CNNM2Q9H8M5 875 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 TXLNGQ9NUQ3 528 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 LEMD3Q9Y2U8 911 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SALL1Q9NSC2 1324 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 SFMBT2Q5VUG0 894 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 VCXQ9H320 206 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 RAPGEF5Q92565 580 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 NOC4LQ9BVI4 516 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 TANGO6Q9C0B7 1094 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 UTP11Q9Y3A2 253 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 TLDC2A0PJX2 215 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 ALDH3A1P30838 453 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 EPS15P42566 896 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 TMEM87BQ96K49 555 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 DMGDHQ9UI17 866 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 TRAPPC3O43617 180 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 COPS6Q7L5N1 327 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 CCDC84Q86UT8 332 aaPredicted RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 VPS36Q86VN1 386 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 OSBP2Q969R2 916 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 DTNBP1Q96EV8 351 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 FAXDC2Q96IV6 333 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.54□□□□□ -1.52
HERC1-201ENST00000443617 PCDHB6Q9Y5E3 794 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 CDK12Q9NYV4 1490 aaPredicted RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 TTC36A6NLP5 189 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 ORC4O43929 436 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 CRELD2Q6UXH1 353 aaPredicted RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 RNF10Q8N5U6 811 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 C15orf41Q9Y2V0 281 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 ARHGEF40Q8TER5 1519 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 IGF2BP3O00425 579 aaKnown RBP eCLIP5.54□□□□□ -1.52
HERC1-201ENST00000443617 CCND1P24385 295 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 EPHA10Q5JZY3 1008 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 TSEN2Q8NCE0 465 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 MOV10L1Q9BXT6 1211 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 RASAL2Q9UJF2 1139 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 NOVA2Q9UNW9 492 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 FMNL1O95466 1100 aaPredicted RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 KRT2P35908 639 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 TIMM10P62072 90 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 TAF11Q15544 211 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 MB21D2Q8IYB1 491 aaPredicted RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 RNF41Q9H4P4 317 aaPredicted RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 SLC4A4Q9Y6R1 1079 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 ARID4AP29374 1257 aaPredicted RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 HSPA9P38646 679 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 EZH2Q15910 746 aaKnown RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 LMBR1LQ6UX01 489 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 MMRN2Q9H8L6 949 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 TMBIM4Q9HC24 238 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 MYBL2P10244 700 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 TTC38Q5R3I4 469 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 THAP9Q9H5L6 903 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 LRWD1Q9UFC0 647 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 NCK2O43639 380 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 MCM7P33993 719 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 RANBP1P43487 201 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 CD302Q8IX05 232 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 TSG101Q99816 390 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 FBXO2Q9UK22 296 aaPredicted RBP5.54□□□□□ -1.52
HERC1-201ENST00000443617 POGZQ7Z3K3 1410 aa5.54□□□□□ -1.52
HERC1-201ENST00000443617 A0A0G2JLW4 131 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 CASKIN2Q8WXE0 1202 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 MS4A14Q96JA4 679 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 AGXT2Q9BYV1 514 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 DBN1Q16643 649 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 MREGQ8N565 214 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 FBXO41Q8TF61 875 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 REXO2Q9Y3B8 237 aaKnown RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 A0A1W2PQC6 194 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 LIN7AO14910 233 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 EVI5O60447 810 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 PECAM1P16284 738 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 PLEKHG3A1L390 1219 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 GRID2IPA4D2P6 1211 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 CTCFP49711 727 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 XAGE2Q96GT9 111 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 XPO6Q96QU8 1125 aaKnown RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 NAPBQ9H115 298 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 ACEP12821 1306 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 B4E1Z4 1266 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 FAM153BP0C7A2 387 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 FAM153CQ494X1 144 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 HAUS3Q68CZ6 603 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 APLFQ8IW19 511 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 MDM1Q8TC05 714 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 STAMQ92783 540 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 NKIRAS1Q9NYS0 192 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 FAM153AQ9UHL3 310 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 TFR2Q9UP52 801 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 PBX1P40424 430 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms