RNA–Protein interactions for RNA: ENST00000442667.2

CDCA4P1-201, Transcript of cell division cycle associated 4 pseudogene 1, humanhuman

BASIC

Gene CDCA4P1, Length 624 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P1-201ENST00000442667 CPXCR1Q8N123 301 aa11.84□□□□□ -0.51
CDCA4P1-201ENST00000442667 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
CDCA4P1-201ENST00000442667 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
CDCA4P1-201ENST00000442667 PIGSQ96S52 555 aa11.84□□□□□ -0.51
CDCA4P1-201ENST00000442667 SPZ1Q9BXG8 430 aa11.84□□□□□ -0.51
CDCA4P1-201ENST00000442667 MOV10L1Q9BXT6 1211 aaKnown RBP11.84□□□□□ -0.51
CDCA4P1-201ENST00000442667 FKTNO75072 461 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 TAL1P17542 331 aaPredicted RBP11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 CTCFP49711 727 aaPredicted RBP11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 SCRN1Q12765 414 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 NTRK3Q16288 839 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 CDC37Q16543 378 aaPredicted RBP11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 QRICH1Q2TAL8 776 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 RIOX2Q8IUF8 465 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 NECAB1Q8N987 351 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 TEX13BQ9BXU2 312 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 PORCNQ9H237 461 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 SLKQ9H2G2 1235 aaPredicted RBP11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 RIPK3Q9Y572 518 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 MYH8P13535 1937 aa11.83□□□□□ -0.52
CDCA4P1-201ENST00000442667 LOC285556D6RIA3 1793 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 hCG_1642624A0A1W2PR95 340 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 ZBTB5O15062 677 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 ECM2O94769 699 aaPredicted RBP11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 ICAM1P05362 532 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 IFNAR1P17181 557 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 ERCC3P19447 782 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 CTGFP29279 349 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 LBX1P52954 281 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 CCNA1P78396 465 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 LACTBP83111 547 aaPredicted RBP11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 CAP1Q01518 475 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 SNRNP48Q6IEG0 339 aaKnown RBP11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 HOMER1Q86YM7 354 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 ZSCAN31Q96LW9 406 aaPredicted RBP11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 V9GY48 417 aaPredicted RBP11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 PTPRFP10586 1907 aa11.82□□□□□ -0.52
CDCA4P1-201ENST00000442667 PNMA6FA0A0J9YX94 578 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 PPP1R11O60927 126 aaPredicted RBP11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 SLC25A27O95847 323 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 PSMC4P43686 418 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 MCM2P49736 904 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 ST3GAL1Q11201 340 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 NCAPG2Q86XI2 1143 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 FBXO11Q86XK2 927 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 SHCBP1Q8NEM2 672 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 CD99L2Q8TCZ2 262 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 PHKBQ93100 1093 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 GTF3C6Q969F1 213 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 RRP36Q96EU6 259 aaKnown RBP11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 ARHGAP39Q9C0H5 1083 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 MROH8Q9H579 483 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 PNMA2Q9UL42 364 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 CCPG1Q9ULG6 757 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 CNTNAP5Q8WYK1 1306 aa11.81□□□□□ -0.52
CDCA4P1-201ENST00000442667 CPLX1O14810 134 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 PRPF3O43395 683 aaKnown RBP11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 DTNBO60941 627 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 PPFIA3O75145 1194 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 CTDNEP1O95476 244 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 ALAS1P13196 640 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 MAPK4P31152 587 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 COPB2P35606 906 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 FCGRTP55899 365 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 KIF22Q14807 665 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 TKFCQ3LXA3 575 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 CPLX2Q6PUV4 134 aaKnown RBP11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 CHST13Q8NET6 341 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 ERO1AQ96HE7 468 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 TMX3Q96JJ7 454 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 TRERF1Q96PN7 1200 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 SH2B1Q9NRF2 756 aaPredicted RBP11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 RNF146Q9NTX7 359 aa11.8□□□□□ -0.52
CDCA4P1-201ENST00000442667 PTPREP23469 700 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 PKN1Q16512 942 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 USH1GQ495M9 461 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 MUM1L1Q5H9M0 696 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 GPR142Q7Z601 462 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 PLEKHH3Q7Z736 793 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 CLEC4DQ8WXI8 215 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 SNX21Q969T3 373 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 COA7Q96BR5 231 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 SLC26A6Q9BXS9 759 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 RNF26Q9BY78 433 aaPredicted RBP11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 HOMER2Q9NSB8 354 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 SEC63Q9UGP8 760 aaKnown RBP11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 GJD2Q9UKL4 321 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
CDCA4P1-201ENST00000442667 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
CDCA4P1-201ENST00000442667 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms