RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 KRT40Q6A162 431 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 ALYREFQ86V81 257 aaKnown RBP16.82■□□□□ 0.28
LINC00642-202ENST00000442515 VWCEQ96DN2 955 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 SLF1Q9BQI6 1058 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 KATNBL1Q9H079 304 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 CERS4Q9HA82 394 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 WDFY4Q6ZS81 3184 aa16.81■□□□□ 0.28
LINC00642-202ENST00000442515 ASTN1O14525 1302 aa16.81■□□□□ 0.28
LINC00642-202ENST00000442515 CYP2D7A0A087X1C5 515 aa16.81■□□□□ 0.28
LINC00642-202ENST00000442515 TCRBV5S4A2TA0A5A2 114 aa16.81■□□□□ 0.28
LINC00642-202ENST00000442515 CDK8P49336 464 aa16.81■□□□□ 0.28
LINC00642-202ENST00000442515 ITGA7Q13683 1181 aa16.81■□□□□ 0.28
LINC00642-202ENST00000442515 SCLYQ96I15 445 aa16.81■□□□□ 0.28
LINC00642-202ENST00000442515 NUP88Q99567 741 aaPredicted RBP16.81■□□□□ 0.28
LINC00642-202ENST00000442515 COL11A1P12107 1806 aaPredicted RBP16.81■□□□□ 0.28
LINC00642-202ENST00000442515 PRRC2BQ5JSZ5 2229 aaKnown RBP16.81■□□□□ 0.28
LINC00642-202ENST00000442515 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.8■□□□□ 0.28
LINC00642-202ENST00000442515 IPO8O15397 1037 aaKnown RBP16.8■□□□□ 0.28
LINC00642-202ENST00000442515 PRKAB2O43741 272 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 B4GALT4O60513 344 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 SLC4A3P48751 1232 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 TTLL4Q14679 1199 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 TTF1Q15361 905 aaPredicted RBP16.8■□□□□ 0.28
LINC00642-202ENST00000442515 TMEM67Q5HYA8 995 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00642-202ENST00000442515 AACSQ86V21 672 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 RPUSD2Q8IZ73 545 aaKnown RBP16.8■□□□□ 0.28
LINC00642-202ENST00000442515 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
LINC00642-202ENST00000442515 TRPV6Q9H1D0 765 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 ARMT1Q9H993 441 aa16.8■□□□□ 0.28
LINC00642-202ENST00000442515 ZNFX1Q9P2E3 1918 aaKnown RBP16.8■□□□□ 0.28
LINC00642-202ENST00000442515 CABYRO75952 493 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 C12orf60Q5U649 245 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 C16orf86Q6ZW13 317 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 TLK2Q86UE8 772 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 CCDC144CPQ8IYA2 1237 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 CPXCR1Q8N123 301 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 ANKRD35Q8N283 1001 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 TMEM57Q8N5G2 664 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 HLA-CQ95604 372 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 LRRC37A2A6NM11 1700 aa16.79■□□□□ 0.28
LINC00642-202ENST00000442515 GBF1Q92538 1859 aa16.78■□□□□ 0.28
LINC00642-202ENST00000442515 ATP2A1O14983 1001 aa16.78■□□□□ 0.28
LINC00642-202ENST00000442515 ARHGEF15O94989 841 aa16.78■□□□□ 0.28
LINC00642-202ENST00000442515 PTGS1P23219 599 aa16.78■□□□□ 0.28
LINC00642-202ENST00000442515 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
LINC00642-202ENST00000442515 NOL8Q76FK4 1167 aaKnown RBP16.78■□□□□ 0.28
LINC00642-202ENST00000442515 ARNTL2Q8WYA1 636 aa16.78■□□□□ 0.28
LINC00642-202ENST00000442515 AGBL1Q96MI9 1066 aa16.78■□□□□ 0.28
LINC00642-202ENST00000442515 ATP8A2Q9NTI2 1148 aa16.78■□□□□ 0.28
LINC00642-202ENST00000442515 GNEQ9Y223 722 aaKnown RBP16.78■□□□□ 0.28
LINC00642-202ENST00000442515 PI4K2BG5E9Z4 385 aa16.77■□□□□ 0.28
LINC00642-202ENST00000442515 MBD4O95243 580 aa16.77■□□□□ 0.28
LINC00642-202ENST00000442515 PFKMP08237 780 aa16.77■□□□□ 0.28
LINC00642-202ENST00000442515 TNFAIP2Q03169 654 aa16.77■□□□□ 0.28
LINC00642-202ENST00000442515 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00642-202ENST00000442515 SEZ6LQ9BYH1 1024 aa16.77■□□□□ 0.28
LINC00642-202ENST00000442515 RAVER2Q9HCJ3 691 aaKnown RBP16.77■□□□□ 0.28
LINC00642-202ENST00000442515 CD320Q9NPF0 282 aa16.77■□□□□ 0.28
LINC00642-202ENST00000442515 USP17L12C9JPN9 530 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 USP17L21D6R901 530 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 GOLIM4O00461 696 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 NDUFB10O96000 172 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 PSMC6P62333 389 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 TAP1Q03518 808 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 SLFNL1Q499Z3 407 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 AMOTL1Q8IY63 956 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 PRPF38AQ8NAV1 312 aaKnown RBP16.76■□□□□ 0.27
LINC00642-202ENST00000442515 DNAJC2Q99543 621 aaKnown RBP16.76■□□□□ 0.27
LINC00642-202ENST00000442515 FBXO40Q9UH90 709 aa16.76■□□□□ 0.27
LINC00642-202ENST00000442515 CTDP1Q9Y5B0 961 aaPredicted RBP16.76■□□□□ 0.27
LINC00642-202ENST00000442515 ZEB2O60315 1214 aa16.75■□□□□ 0.27
LINC00642-202ENST00000442515 ZBED4O75132 1171 aa16.75■□□□□ 0.27
LINC00642-202ENST00000442515 DEFB128Q7Z7B8 93 aa16.75■□□□□ 0.27
LINC00642-202ENST00000442515 CHST13Q8NET6 341 aa16.75■□□□□ 0.27
LINC00642-202ENST00000442515 KIFC2Q96AC6 838 aa16.75■□□□□ 0.27
LINC00642-202ENST00000442515 SLC9A7Q96T83 725 aa16.75■□□□□ 0.27
LINC00642-202ENST00000442515 ALDH8A1Q9H2A2 487 aaPredicted RBP16.75■□□□□ 0.27
LINC00642-202ENST00000442515 SLC38A10Q9HBR0 1119 aa16.75■□□□□ 0.27
LINC00642-202ENST00000442515 PRR33A8MZF0 331 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 F5H6K3 240 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 DYNC1LI2O43237 492 aaPredicted RBP16.74■□□□□ 0.27
LINC00642-202ENST00000442515 SMPD1P17405 629 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 CNTN2Q02246 1040 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 KLRC3Q07444 240 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 GRB10Q13322 594 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 AP5M1Q9H0R1 490 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 HOMER2Q9NSB8 354 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 TRMT13Q9NUP7 481 aaKnown RBP16.74■□□□□ 0.27
LINC00642-202ENST00000442515 EXOC6BQ9Y2D4 811 aa16.74■□□□□ 0.27
LINC00642-202ENST00000442515 LPXNO60711 386 aa16.73■□□□□ 0.27
LINC00642-202ENST00000442515 CYP2C9P11712 490 aa16.73■□□□□ 0.27
LINC00642-202ENST00000442515 MRE11P49959 708 aa16.73■□□□□ 0.27
LINC00642-202ENST00000442515 SPRED2Q7Z698 418 aa16.73■□□□□ 0.27
LINC00642-202ENST00000442515 ERC1Q8IUD2 1116 aa16.73■□□□□ 0.27
LINC00642-202ENST00000442515 FAM133AQ8N9E0 248 aa16.73■□□□□ 0.27
LINC00642-202ENST00000442515 IL1RAPL2Q9NP60 686 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms