RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TRAIPQ9BWF2 469 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 TRIM31Q9BZY9 425 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 CCDC113Q9H0I3 377 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 NHEJ1Q9H9Q4 299 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 FAM207AQ9NSI2 230 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 MAGEC2Q9UBF1 373 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 PLAAQ9Y263 795 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 STK38LQ9Y2H1 464 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 SLC4A4Q9Y6R1 1079 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 SH3TC1Q8TE82 1336 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 TLDC2A0PJX2 215 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 PSMD14O00487 310 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 FTCDO95954 541 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 PARP1P09874 1014 aaKnown RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 CYLC1P35663 651 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 EPHB4P54760 987 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 ANKRD13DQ6ZTN6 518 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 TOM1L2Q6ZVM7 507 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 SPDYE1Q8NFV5 336 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 UBLCP1Q8WVY7 318 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 OSBPL7Q9BZF2 842 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 STIM2Q9P246 746 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 TUBGCP6Q96RT7 1819 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 WNT7AO00755 349 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 TACC1O75410 805 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 MDH1P40925 334 aaKnown RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 MTIF2P46199 727 aaKnown RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 KRT83P78385 493 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 HLFQ16534 295 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 GNPTABQ3T906 1256 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 TCP11X2Q5H9J9 407 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 TAX1BP1Q86VP1 789 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 C2CD5Q86YS7 1000 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 ANKRD13AQ8IZ07 590 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 MSL3Q8N5Y2 521 aaKnown RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 CCDC51Q96ER9 411 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 LBHD1Q9BQE6 289 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 ZBTB3Q9H5J0 574 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 SPATS2LQ9NUQ6 558 aaKnown RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 RBM28Q9NW13 759 aaKnown RBP8.36□□□□□ -1.07
HDAC9-214ENST00000441542 MYO1AQ9UBC5 1043 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 NUB1Q9Y5A7 615 aa8.36□□□□□ -1.07
HDAC9-214ENST00000441542 TRIM75PA6NK02 468 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 PBX1P40424 430 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 SARSP49591 514 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 TDRD12Q587J7 1177 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 CCDC178Q5BJE1 867 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 EARS2Q5JPH6 523 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 RBM26Q5T8P6 1007 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 HAUS3Q68CZ6 603 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 ARMC2Q8NEN0 867 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 HVCN1Q96D96 273 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 SELENOSQ9BQE4 189 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 IFIH1Q9BYX4 1025 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 COPRSQ9NQ92 184 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 ANKRD26Q9UPS8 1709 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 TARSL2A2RTX5 802 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 TESPA1A2RU30 521 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 C21orf2O43822 256 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 MARCH6O60337 910 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 DIAPH2O60879 1101 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 RASSF9O75901 435 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 MCM7P33993 719 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 SCTRP47872 440 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 DDR1Q08345 913 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 CRYMQ14894 314 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 DNAAF5Q86Y56 855 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 CACNA2D3Q8IZS8 1091 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 EHBP1Q8NDI1 1231 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 STAG1Q8WVM7 1258 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 LMBR1Q8WVP7 490 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 MMRN2Q9H8L6 949 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 NOD2Q9HC29 1040 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 DDX21Q9NR30 783 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 CEP126Q9P2H0 1117 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 NOVA2Q9UNW9 492 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 PPME1Q9Y570 386 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 RPS6KL1Q9Y6S9 549 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 ABCC6O95255 1503 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 CAND2O75155 1236 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 IFNAR2P48551 515 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 RASSF7Q02833 373 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 PSMD2Q13200 908 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 PAPD7Q5XG87 772 aaKnown RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 WDR59Q6PJI9 974 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 CREG2Q8IUH2 290 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 KIF2BQ8N4N8 673 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 ZNF513Q8N8E2 541 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 PRCCQ92733 491 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-214ENST00000441542 OSBPL9Q96SU4 736 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 GOLPH3Q9H4A6 298 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 CD2APQ9Y5K6 639 aa8.35□□□□□ -1.07
HDAC9-214ENST00000441542 NWD1Q149M9 1564 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 SETD1AO15047 1707 aaKnown RBP8.34□□□□□ -1.07
HDAC9-214ENST00000441542 FOXP2O15409 715 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 RNMTO43148 476 aaKnown RBP8.34□□□□□ -1.07
HDAC9-214ENST00000441542 PRCPP42785 496 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms