RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
PLOD3-205ENST00000440925 PNMA6FA0A0J9YX94 578 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 PTPDC1A2A3K4 754 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 OPLAHO14841 1288 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 ATP2A1O14983 1001 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 ZBTB5O15062 677 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 CA12O43570 354 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 BCRP11274 1271 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
PLOD3-205ENST00000440925 CDC37Q16543 378 aaPredicted RBP17.26■□□□□ 0.35
PLOD3-205ENST00000440925 CCDC174Q6PII3 467 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 TBC1D5Q92609 795 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 COA7Q96BR5 231 aa17.26■□□□□ 0.35
PLOD3-205ENST00000440925 LLPHQ9BRT6 129 aaKnown RBP17.26■□□□□ 0.35
PLOD3-205ENST00000440925 ISY1Q9ULR0 285 aaKnown RBP17.26■□□□□ 0.35
PLOD3-205ENST00000440925 TBC1D8O95759 1140 aa17.25■□□□□ 0.35
PLOD3-205ENST00000440925 CTGFP29279 349 aa17.25■□□□□ 0.35
PLOD3-205ENST00000440925 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
PLOD3-205ENST00000440925 SSRP1Q08945 709 aaKnown RBP17.25■□□□□ 0.35
PLOD3-205ENST00000440925 IKQ13123 557 aaPredicted RBP17.25■□□□□ 0.35
PLOD3-205ENST00000440925 PFKFB3Q16875 520 aaPredicted RBP17.25■□□□□ 0.35
PLOD3-205ENST00000440925 REM2Q8IYK8 340 aaPredicted RBP17.25■□□□□ 0.35
PLOD3-205ENST00000440925 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
PLOD3-205ENST00000440925 RNF26Q9BY78 433 aaPredicted RBP17.25■□□□□ 0.35
PLOD3-205ENST00000440925 MORF4L1Q9UBU8 362 aa17.25■□□□□ 0.35
PLOD3-205ENST00000440925 CPA4Q9UI42 421 aa17.25■□□□□ 0.35
PLOD3-205ENST00000440925 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
PLOD3-205ENST00000440925 TLR2O60603 784 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 ZBED4O75132 1171 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 TRPA1O75762 1119 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 TAF1CQ15572 869 aaPredicted RBP17.24■□□□□ 0.35
PLOD3-205ENST00000440925 NPY5RQ15761 445 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 WWC2Q6AWC2 1192 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 HOMER1Q86YM7 354 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 CPXCR1Q8N123 301 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 CLEC4DQ8WXI8 215 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
PLOD3-205ENST00000440925 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
PLOD3-205ENST00000440925 CFHR5Q9BXR6 569 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 MOV10L1Q9BXT6 1211 aaKnown RBP17.24■□□□□ 0.35
PLOD3-205ENST00000440925 ORC3Q9UBD5 711 aaPredicted RBP17.24■□□□□ 0.35
PLOD3-205ENST00000440925 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
PLOD3-205ENST00000440925 STXBP3O00186 592 aa17.23■□□□□ 0.35
PLOD3-205ENST00000440925 CPLX1O14810 134 aa17.23■□□□□ 0.35
PLOD3-205ENST00000440925 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
PLOD3-205ENST00000440925 ICAM1P05362 532 aa17.23■□□□□ 0.35
PLOD3-205ENST00000440925 STAT3P40763 770 aa17.23■□□□□ 0.35
PLOD3-205ENST00000440925 MUM1L1Q5H9M0 696 aa17.23■□□□□ 0.35
PLOD3-205ENST00000440925 RRP36Q96EU6 259 aaKnown RBP17.23■□□□□ 0.35
PLOD3-205ENST00000440925 PORCNQ9H237 461 aa17.23■□□□□ 0.35
PLOD3-205ENST00000440925 WBP1LQ9NX94 342 aa17.23■□□□□ 0.35
PLOD3-205ENST00000440925 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 A0A0G2JMZ2 1700 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 COL11A1P12107 1806 aaPredicted RBP17.22■□□□□ 0.35
PLOD3-205ENST00000440925 FDX1P10109 184 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 SCG2P13521 617 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 GJB2P29033 226 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 ERVK-9P63128 1117 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 ERVK-24P63145 666 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 PARK7Q99497 189 aaKnown RBP17.22■□□□□ 0.35
PLOD3-205ENST00000440925 PAGR1Q9BTK6 254 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 SPATC1LQ9H0A9 340 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 PNMA3Q9UL41 463 aa17.22■□□□□ 0.35
PLOD3-205ENST00000440925 DEXIO95424 95 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.35
PLOD3-205ENST00000440925 OAZ1P54368 228 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 RIOX2Q8IUF8 465 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 MB21D1Q8N884 522 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 AMNQ9BXJ7 453 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 ZFYVE28Q9HCC9 887 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 BARHL2Q9NY43 387 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 PCDHA1Q9Y5I3 950 aa17.21■□□□□ 0.35
PLOD3-205ENST00000440925 ALDH1A1P00352 501 aa17.2■□□□□ 0.34
PLOD3-205ENST00000440925 DDIT3P35638 169 aa17.2■□□□□ 0.34
PLOD3-205ENST00000440925 USH1GQ495M9 461 aa17.2■□□□□ 0.34
PLOD3-205ENST00000440925 SNRNP48Q6IEG0 339 aaKnown RBP17.2■□□□□ 0.34
PLOD3-205ENST00000440925 JMYQ8N9B5 988 aa17.2■□□□□ 0.34
PLOD3-205ENST00000440925 EFCC1Q9HA90 598 aa17.2■□□□□ 0.34
PLOD3-205ENST00000440925 VPS54Q9P1Q0 977 aa17.2■□□□□ 0.34
PLOD3-205ENST00000440925 KCNJ14Q9UNX9 436 aa17.2■□□□□ 0.34
PLOD3-205ENST00000440925 NFIBO00712 420 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 EDIL3O43854 480 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 CDKL5O76039 1030 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 ERCC3P19447 782 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 CPLX2Q6PUV4 134 aaKnown RBP17.19■□□□□ 0.34
PLOD3-205ENST00000440925 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
PLOD3-205ENST00000440925 TRERF1Q96PN7 1200 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 ALG1Q9BT22 464 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 TEX13BQ9BXU2 312 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 CCPG1Q9ULG6 757 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 CEP350Q5VT06 3117 aa17.19■□□□□ 0.34
PLOD3-205ENST00000440925 M0R2N6 131 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 MEIS2O14770 477 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 ALAS1P13196 640 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 PLS1Q14651 629 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms