RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ASB14A6NK59 587 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 APBB1O00213 710 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 ZEB2O60315 1214 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 RAG1P15918 1043 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 ACLYP53396 1101 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 FAM47AQ5JRC9 791 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 AKNAD1Q5T1N1 836 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 C20orf194Q5TEA3 1177 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 CCSAPQ6IQ19 270 aaPredicted RBP7.12□□□□□ -1.27
PTPRR-204ENST00000440835 CHURC1Q8WUH1 139 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 CDX2Q99626 313 aaPredicted RBP7.12□□□□□ -1.27
PTPRR-204ENST00000440835 MKNK2Q9HBH9 465 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 SLC38A10Q9HBR0 1119 aa7.12□□□□□ -1.27
PTPRR-204ENST00000440835 RNF113AO15541 343 aaKnown RBP7.11□□□□□ -1.27
PTPRR-204ENST00000440835 CYP2D6P10635 497 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 RASA1P20936 1047 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 CDK7P50613 346 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 PDE4BQ07343 736 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 RAB30Q15771 203 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 MFSD5Q6N075 450 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 ZNF444Q8N0Y2 327 aaPredicted RBP7.11□□□□□ -1.27
PTPRR-204ENST00000440835 TMEM199Q8N511 208 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 MAFAQ8NHW3 353 aaPredicted RBP7.11□□□□□ -1.27
PTPRR-204ENST00000440835 PANK1Q8TE04 598 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 DDX11Q96FC9 970 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 DYNLL2Q96FJ2 89 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 RNPC3Q96LT9 517 aaKnown RBP7.11□□□□□ -1.27
PTPRR-204ENST00000440835 GLT1D1Q96MS3 346 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 PRDM5Q9NQX1 630 aaPredicted RBP7.11□□□□□ -1.27
PTPRR-204ENST00000440835 STARD7Q9NQZ5 370 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 TMEM39AQ9NV64 488 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 COG6Q9Y2V7 657 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 NDUFB9Q9Y6M9 179 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 SYNRGQ9UMZ2 1314 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 LRRC37A2A6NM11 1700 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 TRIM43BA6NCK2 446 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 TTLL1O95922 423 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 FAM83BQ5T0W9 1011 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 RASIP1Q5U651 963 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 SIRT2Q8IXJ6 389 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 SLC44A5Q8NCS7 719 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 TRIM43Q96BQ3 446 aaPredicted RBP7.11□□□□□ -1.27
PTPRR-204ENST00000440835 GMCL1Q96IK5 515 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 ZFP91Q96JP5 570 aaPredicted RBP7.11□□□□□ -1.27
PTPRR-204ENST00000440835 BOLA2Q9H3K6 86 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 TBX21Q9UL17 535 aa7.11□□□□□ -1.27
PTPRR-204ENST00000440835 SMCHD1A6NHR9 2005 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 F5H6K3 240 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 ERC2O15083 957 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 KLRC3Q07444 240 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 ACVR2BQ13705 512 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 SNRNP48Q6IEG0 339 aaKnown RBP7.1□□□□□ -1.27
PTPRR-204ENST00000440835 NEDD1Q8NHV4 660 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 PLCD4Q9BRC7 762 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 RWDD1Q9H446 243 aaPredicted RBP7.1□□□□□ -1.27
PTPRR-204ENST00000440835 GSG1L2A8MUP6 293 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 PATL2C9JE40 543 aaKnown RBP7.1□□□□□ -1.27
PTPRR-204ENST00000440835 ARVCFO00192 962 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 PRKAB2O43741 272 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 TPM2P07951 284 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 PFKMP08237 780 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 FAAP100Q0VG06 881 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 SPICE1Q8N0Z3 855 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 SLC43A3Q8NBI5 491 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.1□□□□□ -1.27
PTPRR-204ENST00000440835 COL25A1Q9BXS0 654 aaPredicted RBP7.1□□□□□ -1.27
PTPRR-204ENST00000440835 MTMR4Q9NYA4 1195 aa7.1□□□□□ -1.27
PTPRR-204ENST00000440835 SNAI1O95863 264 aaPredicted RBP7.09□□□□□ -1.27
PTPRR-204ENST00000440835 NDUFB10O96000 172 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 MORC4Q8TE76 937 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 STAG1Q8WVM7 1258 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 MPHOSPH6Q99547 160 aaKnown RBP7.09□□□□□ -1.27
PTPRR-204ENST00000440835 DCTPP1Q9H773 170 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 ACAD9Q9H845 621 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.09□□□□□ -1.27
PTPRR-204ENST00000440835 GOLGA6L3A6NEY3 463 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 ESPNB1AK53 854 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 KPNA6O60684 536 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 PCP11498 1178 aaKnown RBP7.09□□□□□ -1.27
PTPRR-204ENST00000440835 BMP3P12645 472 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 FOSL2P15408 326 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 MCCP23508 829 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 KCNA10Q16322 511 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 PRAMEF19Q5SWL8 479 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 C9orf50Q5SZB4 431 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 IQSEC1Q6DN90 963 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 ANKRD35Q8N283 1001 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 HERVK_113Q902F9 699 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 PUS7LQ9H0K6 701 aaKnown RBP7.09□□□□□ -1.27
PTPRR-204ENST00000440835 VTA1Q9NP79 307 aa7.09□□□□□ -1.27
PTPRR-204ENST00000440835 B4DLN1 442 aa7.09□□□□□ -1.28
PTPRR-204ENST00000440835 PGK2P07205 417 aa7.09□□□□□ -1.28
PTPRR-204ENST00000440835 RFC2P35250 354 aa7.09□□□□□ -1.28
PTPRR-204ENST00000440835 STAT2P52630 851 aa7.09□□□□□ -1.28
PTPRR-204ENST00000440835 MRPL12P52815 198 aaKnown RBP7.09□□□□□ -1.28
PTPRR-204ENST00000440835 RPUSD2Q8IZ73 545 aaKnown RBP7.09□□□□□ -1.28
PTPRR-204ENST00000440835 CNPY4Q8N129 248 aa7.09□□□□□ -1.28
PTPRR-204ENST00000440835 FAM133AQ8N9E0 248 aa7.09□□□□□ -1.28
PTPRR-204ENST00000440835 ATXN2LQ8WWM7 1075 aaKnown RBP7.09□□□□□ -1.28
PTPRR-204ENST00000440835 GAS2L1Q99501 681 aaPredicted RBP7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms