RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 PODNQ7Z5L7 613 aa9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 GPKOWQ92917 476 aaPredicted RBP eCLIP9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 MTMR8Q96EF0 704 aa9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 ERO1AQ96HE7 468 aa9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 SRRTQ9BXP5 876 aaKnown RBP9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 ZC3H12CQ9C0D7 883 aaKnown RBP9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 GLT8D2Q9H1C3 349 aa9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 SEC63Q9UGP8 760 aaKnown RBP9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 COL2A1P02458 1487 aaPredicted RBP9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 MYH8P13535 1937 aa9.27□□□□□ -0.93
SPIRE1-204ENST00000440472 ADAMTS3O15072 1205 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 OR52Z1P0C646 297 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 NAPAP54920 295 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 GTF2IP78347 998 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 PAK1Q13153 545 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 ZNF827Q17R98 1081 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 SOGA3Q5TF21 947 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 HEATR3Q7Z4Q2 680 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 NEK8Q86SG6 692 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 REXO1L1PQ8IX06 675 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 ADSSL1Q8N142 457 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 MKL1Q969V6 931 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 NAP1L4Q99733 375 aaKnown RBP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 BAG1Q99933 345 aaPredicted RBP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 SAMSN1Q9NSI8 373 aaKnown RBP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 COL11A2P13942 1736 aaPredicted RBP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 ZNF646O15015 1829 aaPredicted RBP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 SMCO2A6NFE2 343 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 AKR1B15C9JRZ8 316 aaPredicted RBP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 TRIM37O94972 964 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 TTLL1O95922 423 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 UBA7P41226 1012 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 STAT6P42226 847 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 FXR2P51116 673 aaKnown RBP eCLIP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 PDIA5Q14554 519 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 GPATCH4Q5T3I0 446 aaKnown RBP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 RRAGBQ5VZM2 374 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 SLC51AQ86UW1 340 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 IGSF22Q8N9C0 903 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 ANKRD20A12PQ8NF67 263 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 ZDHHC15Q96MV8 337 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 TMEM60Q9H2L4 133 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 DHX36Q9H2U1 1008 aaKnown RBP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 SERPINB13Q9UIV8 391 aa9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.26□□□□□ -0.93
SPIRE1-204ENST00000440472 KLRC4O43908 158 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 NCBP1Q09161 790 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 INF2Q27J81 1249 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 MCTP2Q6DN12 878 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 TRIM65Q6PJ69 517 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 CERS5Q8N5B7 392 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 GIMAP8Q8ND71 665 aaPredicted RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 TEKT1Q969V4 418 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 DHTKD1Q96HY7 919 aaPredicted RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 MTMR9Q96QG7 549 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 IDI2Q9BXS1 227 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 TMX4Q9H1E5 349 aaPredicted RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 THAP9Q9H5L6 903 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 SYNPO2Q9UMS6 1093 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 PNMA6FA0A0J9YX94 578 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 A0A1W2PQC6 194 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 SLU7O95391 586 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 HLA-DOAP06340 250 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 EEF1GP26641 437 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 SHMT1P34896 483 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 AMPD3Q01432 767 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 ZNF543Q08ER8 600 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 STIM1Q13586 685 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 PPP4R3AQ6IN85 833 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 APOBEC3HQ6NTF7 200 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 DPP8Q6V1X1 898 aaPredicted RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 COL23A1Q86Y22 540 aaPredicted RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 CNGA4Q8IV77 575 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 TRMT44Q8IYL2 757 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 REXO1Q8N1G1 1221 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 CCDC47Q96A33 483 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 RIC8AQ9NPQ8 531 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 TRMT1Q9NXH9 659 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 CGNQ9P2M7 1197 aaKnown RBP9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 STK17AQ9UEE5 414 aa9.25□□□□□ -0.93
SPIRE1-204ENST00000440472 USP17L5A8MUK1 530 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 GCFC2P16383 781 aaKnown RBP9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 CLK2P49760 499 aaKnown RBP9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 GRIPAP1Q4V328 841 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 STRIP1Q5VSL9 837 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 CC2D2BQ6DHV5 1058 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 CDC42EP5Q6NZY7 148 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 CABP7Q86V35 215 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 RASGRP4Q8TDF6 673 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 IQCDQ96DY2 449 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 CCDC94Q9BW85 323 aaPredicted RBP9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 LRRC27Q9C0I9 530 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 USP40Q9NVE5 1235 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 NYAP2Q9P242 653 aa9.24□□□□□ -0.93
SPIRE1-204ENST00000440472 TTF2Q9UNY4 1162 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms