RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 ERO1AQ96HE7 468 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 GMCL1Q96IK5 515 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 TRIM47Q96LD4 638 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 PPP1R9AQ9ULJ8 1098 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 FRMPD2Q68DX3 1309 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 COL11A1P12107 1806 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 MYH6P13533 1939 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 MGAMO43451 1857 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SLC1A4P43007 532 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PSMC4P43686 418 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TTBK2Q6IQ55 1244 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 OTOP1Q7RTM1 612 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CTU1Q7Z7A3 348 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 DGKHQ86XP1 1220 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ANKS1AQ92625 1134 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SLF1Q9BQI6 1058 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 GZF1Q9H116 711 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TRIM17Q9Y577 477 aa16.83■□□□□ 0.28
TNFRSF1A-204ENST00000440083 NID2Q14112 1375 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TMEM232C9JQI7 657 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PDHBP11177 359 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 FOSBP53539 338 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ERVK-9P63128 1117 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ERVK-24P63145 666 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 IFIT1BQ5T764 474 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 LBX2Q6XYB7 198 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PNMA1Q8ND90 353 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 GPRC5AQ8NFJ5 357 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 DCAF4Q8WV16 495 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PORCNQ9H237 461 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 KAT14Q9H8E8 782 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
TNFRSF1A-204ENST00000440083 FMNL1O95466 1100 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SLC16A2P36021 539 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SNAP25P60880 206 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 KRT85P78386 507 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CCDC178Q5BJE1 867 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TMEM87AQ8NBN3 555 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 REPS2Q8NFH8 660 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 GTF3C2Q8WUA4 911 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ZSCAN16Q9H4T2 348 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 EFCC1Q9HA90 598 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 HOXC10Q9NYD6 342 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ORC3Q9UBD5 711 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 FEM1BQ9UK73 627 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CNPY2Q9Y2B0 182 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 RABGAP1Q9Y3P9 1069 aa16.81■□□□□ 0.28
TNFRSF1A-204ENST00000440083 DOCK3Q8IZD9 2030 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 MYPNQ86TC9 1320 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 VWA5AO00534 786 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 FIBPO43427 364 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 GOLGA8HP0CJ92 632 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SNHG28P0DPA3 235 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TAL1P17542 331 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 RCAN1P53805 252 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 FCGRTP55899 365 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ZNF543Q08ER8 600 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 IKQ13123 557 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PLS1Q14651 629 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 KIF22Q14807 665 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TMEM132BQ14DG7 1078 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 RTN1Q16799 776 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 C8orf76Q96K31 380 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 MCOLN1Q9GZU1 580 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CPVLQ9H3G5 476 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ADAMTS5Q9UNA0 930 aa16.8■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CCDC196A0A1B0GTZ2 297 aa16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TNPO2O14787 897 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 RXRAP19793 462 aa16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 STAT2P52630 851 aa16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 DNM1Q05193 864 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 RESTQ13127 1097 aa16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CCDC144CPQ8IYA2 1237 aa16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ZNF654Q8IZM8 581 aa16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 MYL10Q9BUA6 226 aa16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SPATC1LQ9H0A9 340 aa16.79■□□□□ 0.28
TNFRSF1A-204ENST00000440083 STK36Q9NRP7 1315 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CALM1P0DP23 149 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CALM2P0DP24 149 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CALM3P0DP25 149 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PRKCZQ05513 592 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CATIPQ7Z7H3 387 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 MB21D1Q8N884 522 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PRPF38AQ8NAV1 312 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 WASF1Q92558 559 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 MOV10L1Q9BXT6 1211 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PRR12Q9ULL5 1215 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 GABRQQ9UN88 632 aa16.78■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PLXNB2O15031 1838 aa16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SSRP1Q08945 709 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TRIM29Q14134 588 aa16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SYDE2Q5VT97 1194 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms