RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 DYNC1I1O14576 645 aa17■□□□□ 0.31
IFT140-204ENST00000439987 ZBTB5O15062 677 aa17■□□□□ 0.31
IFT140-204ENST00000439987 PGAP2Q9UHJ9 254 aa17■□□□□ 0.31
IFT140-204ENST00000439987 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
IFT140-204ENST00000439987 PPP1R18Q6NYC8 613 aa17■□□□□ 0.31
IFT140-204ENST00000439987 USP49Q70CQ1 688 aa17■□□□□ 0.31
IFT140-204ENST00000439987 ELOA2Q8IYF1 753 aaPredicted RBP17■□□□□ 0.31
IFT140-204ENST00000439987 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
IFT140-204ENST00000439987 CNNM3Q8NE01 707 aa17■□□□□ 0.31
IFT140-204ENST00000439987 DPF2Q92785 391 aa17■□□□□ 0.31
IFT140-204ENST00000439987 GMCL1Q96IK5 515 aa17■□□□□ 0.31
IFT140-204ENST00000439987 R3HCC1Q9Y3T6 440 aaKnown RBP17■□□□□ 0.31
IFT140-204ENST00000439987 POLR2DO15514 142 aaKnown RBP16.99■□□□□ 0.31
IFT140-204ENST00000439987 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
IFT140-204ENST00000439987 EGFRP00533 1210 aa16.99■□□□□ 0.31
IFT140-204ENST00000439987 GMPSP49915 693 aaPredicted RBP16.99■□□□□ 0.31
IFT140-204ENST00000439987 ARL6IP4Q66PJ3 421 aaKnown RBP16.99■□□□□ 0.31
IFT140-204ENST00000439987 C11orf57Q6ZUT1 292 aaPredicted RBP16.99■□□□□ 0.31
IFT140-204ENST00000439987 C4orf32Q8N8J7 132 aa16.99■□□□□ 0.31
IFT140-204ENST00000439987 VWA3AA6NCI4 1184 aa16.99■□□□□ 0.31
IFT140-204ENST00000439987 NDUFB10O96000 172 aa16.99■□□□□ 0.31
IFT140-204ENST00000439987 TNNI2P48788 182 aa16.99■□□□□ 0.31
IFT140-204ENST00000439987 NONOQ15233 471 aaKnown RBP eCLIP16.99■□□□□ 0.31
IFT140-204ENST00000439987 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
IFT140-204ENST00000439987 A0A087WWV3 80 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 A0A1W2PRG0 241 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 ADCY7P51828 1080 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 EPSTI1Q96J88 318 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 ZBTB21Q9ULJ3 1066 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 MAP3K10Q02779 954 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 SYMPKQ92797 1274 aaKnown RBP16.98■□□□□ 0.31
IFT140-204ENST00000439987 BIN2Q9UBW5 565 aaPredicted RBP16.98■□□□□ 0.31
IFT140-204ENST00000439987 TUBE1Q9UJT0 475 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 PRDM4Q9UKN5 801 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 UTRNP46939 3433 aa16.98■□□□□ 0.31
IFT140-204ENST00000439987 RBM10P98175 930 aaKnown RBP16.97■□□□□ 0.31
IFT140-204ENST00000439987 TNFAIP1Q13829 316 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 RASA3Q14644 834 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 CEP57L1Q8IYX8 460 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 PDILTQ8N807 584 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 ARHGEF10LQ9HCE6 1279 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 PNOCQ13519 176 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 IQCB1Q15051 598 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 IL17AQ16552 155 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 SMAP1Q8IYB5 467 aaPredicted RBP16.97■□□□□ 0.31
IFT140-204ENST00000439987 NUP88Q99567 741 aaPredicted RBP16.97■□□□□ 0.31
IFT140-204ENST00000439987 RIC8AQ9NPQ8 531 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 CNOT7Q9UIV1 285 aaKnown RBP16.97■□□□□ 0.31
IFT140-204ENST00000439987 HOOK1Q9UJC3 728 aaKnown RBP16.97■□□□□ 0.31
IFT140-204ENST00000439987 ZKSCAN5Q9Y2L8 839 aa16.97■□□□□ 0.31
IFT140-204ENST00000439987 ADCY5O95622 1261 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 MDM2Q00987 491 aaPredicted RBP16.96■□□□□ 0.31
IFT140-204ENST00000439987 QRICH1Q2TAL8 776 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 JAKMIP3Q5VZ66 844 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 SAMD7Q7Z3H4 446 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 NAT10Q9H0A0 1025 aaKnown RBP16.96■□□□□ 0.31
IFT140-204ENST00000439987 SPON1Q9HCB6 807 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 SERTAD1Q9UHV2 236 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 ACTN4O43707 911 aaKnown RBP16.96■□□□□ 0.31
IFT140-204ENST00000439987 BMP3P12645 472 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 CAP2P40123 477 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 ECE1P42892 770 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 NEK8Q86SG6 692 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 TMEM260Q9NX78 707 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 TMX2Q9Y320 296 aa16.96■□□□□ 0.31
IFT140-204ENST00000439987 A0A087X0B3 334 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 UQCRHLA0A096LP55 91 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 BIN1O00499 593 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 LAD1O00515 517 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 AP5Z1O43299 807 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 UQCRHP07919 91 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 NLRP12P59046 1061 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 PLCB2Q00722 1185 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 CDC37Q16543 378 aaPredicted RBP16.95■□□□□ 0.3
IFT140-204ENST00000439987 DPCR1Q3MIW9 517 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 KANK3Q6NY19 840 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 ACER1Q8TDN7 264 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 TBCKQ8TEA7 893 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 CCDC39Q9UFE4 941 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 SCAF8Q9UPN6 1271 aaKnown RBP16.95■□□□□ 0.3
IFT140-204ENST00000439987 ZNF541Q9H0D2 1346 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 TMEM232C9JQI7 657 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 LONP1P36776 959 aaKnown RBP16.95■□□□□ 0.3
IFT140-204ENST00000439987 LETM2Q2VYF4 491 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 TBC1D10BQ4KMP7 808 aaPredicted RBP16.95■□□□□ 0.3
IFT140-204ENST00000439987 CUL5Q93034 780 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 TEPSINQ96N21 525 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 TMEM60Q9H2L4 133 aa16.95■□□□□ 0.3
IFT140-204ENST00000439987 FOXN1O15353 648 aa16.94■□□□□ 0.3
IFT140-204ENST00000439987 POSTNQ15063 836 aa16.94■□□□□ 0.3
IFT140-204ENST00000439987 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
IFT140-204ENST00000439987 SPICE1Q8N0Z3 855 aa16.94■□□□□ 0.3
IFT140-204ENST00000439987 GOPCQ9HD26 462 aa16.94■□□□□ 0.3
IFT140-204ENST00000439987 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
IFT140-204ENST00000439987 PRPHP41219 470 aa16.94■□□□□ 0.3
IFT140-204ENST00000439987 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
IFT140-204ENST00000439987 IKQ13123 557 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms