RNA–Protein interactions for RNA: ENST00000439890.3

NANOGP9-201, Transcript of Nanog homeobox pseudogene 9, humanhuman

BASIC

Gene NANOGP9, Length 892 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP9-201ENST00000439890 PPP1R16BQ96T49 567 aa8.09□□□□□ -1.11
NANOGP9-201ENST00000439890 LRRC3Q9BY71 257 aa8.09□□□□□ -1.11
NANOGP9-201ENST00000439890 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
NANOGP9-201ENST00000439890 RNF17Q9BXT8 1623 aaKnown RBP8.09□□□□□ -1.11
NANOGP9-201ENST00000439890 DIP2CQ9Y2E4 1556 aa8.09□□□□□ -1.11
NANOGP9-201ENST00000439890 PRDM15P57071 1507 aaPredicted RBP8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 TET3O43151 1660 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 ATP10AO60312 1499 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 SLC22A31A6NKX4 558 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 DBX1A6NMT0 343 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 RGS13O14921 159 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 KIF3BO15066 747 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 CRKP46108 304 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 SYDE1Q6ZW31 735 aaPredicted RBP8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 OXR1Q8N573 874 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 KRTAP9-9Q9BYP9 154 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 KRTAP9-4Q9BYQ2 154 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 EPB41L4BQ9H329 900 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 DCP1AQ9NPI6 582 aaPredicted RBP8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 ADAMTS1Q9UHI8 967 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 REREQ9P2R6 1566 aa8.08□□□□□ -1.12
NANOGP9-201ENST00000439890 SHISA3A0PJX4 238 aa8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 GREM1O60565 184 aa8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 HPXP02790 462 aa8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 POLR2BP30876 1174 aaKnown RBP8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 RAP1GAPP47736 663 aa8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 NMIQ13287 307 aaPredicted RBP8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 FBXO15Q8NCQ5 510 aaPredicted RBP8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 KCNQ5Q9NR82 932 aa8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 MROH1Q8NDA8 1641 aa8.07□□□□□ -1.12
NANOGP9-201ENST00000439890 SSU72P8A0A1W2PR75 194 aa8.06□□□□□ -1.12
NANOGP9-201ENST00000439890 UBOX5O94941 541 aa8.06□□□□□ -1.12
NANOGP9-201ENST00000439890 ZGLP1P0C6A0 271 aa8.06□□□□□ -1.12
NANOGP9-201ENST00000439890 PDZD8Q8NEN9 1154 aa8.06□□□□□ -1.12
NANOGP9-201ENST00000439890 C19orf44Q9H6X5 657 aa8.06□□□□□ -1.12
NANOGP9-201ENST00000439890 LMTK2Q8IWU2 1503 aa8.06□□□□□ -1.12
NANOGP9-201ENST00000439890 E9PCH4 1651 aa8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 RBM47A0AV96 593 aaKnown RBP8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 ZNF16P17020 682 aaPredicted RBP8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 ZNF165P49910 485 aa8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 CLCQ05315 142 aa8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 DUSP4Q13115 394 aa8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 KIAA0825Q8IV33 1275 aa8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 NKD1Q969G9 470 aa8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 RNF32Q9H0A6 362 aa8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.05□□□□□ -1.12
NANOGP9-201ENST00000439890 YEATS2Q9ULM3 1422 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 AGLP35573 1532 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 FITM1A5D6W6 292 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 NFIBO00712 420 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 CLEC3AO75596 197 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 ATE1O95260 518 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 ZNF76P36508 570 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 NLRC3Q7RTR2 1065 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 ZNF512BQ96KM6 892 aaPredicted RBP8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 SPON2Q9BUD6 331 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 GPR160Q9UJ42 338 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 ZMYM5Q9UJ78 669 aa8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 ZC3H13Q5T200 1668 aaKnown RBP8.04□□□□□ -1.12
NANOGP9-201ENST00000439890 CCDC144AA2RUR9 1427 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 PTPRTO14522 1441 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 SPHKAPQ2M3C7 1700 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 PLA2R1Q13018 1463 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 TSPAN15O95858 294 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 RPL10P27635 214 aaKnown RBP8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 TEKQ02763 1124 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 LILRA2Q8N149 483 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 BHLHE22Q8NFJ8 381 aaPredicted RBP8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 MKRN2Q9H000 416 aaKnown RBP8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 EHMT1Q9H9B1 1298 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 KCNK12Q9HB15 430 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 CEP152O94986 1710 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 TRPM2O94759 1503 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 EFCAB6Q5THR3 1501 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 ARHGEF40Q8TER5 1519 aa8.03□□□□□ -1.12
NANOGP9-201ENST00000439890 FAM86C2PA6NEL3 165 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 TMEM253P0C7T8 217 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 CHRNEQ04844 493 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 WAPLQ7Z5K2 1190 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 TMC3Q7Z5M5 1100 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 SPPL2CQ8IUH8 684 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 SYTL5Q8TDW5 730 aaPredicted RBP8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 TOX2Q96NM4 488 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 HDAC8Q9BY41 377 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 SLC6A17Q9H1V8 727 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 CNNM2Q9H8M5 875 aa8.02□□□□□ -1.13
NANOGP9-201ENST00000439890 NEURL4Q96JN8 1562 aa8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 FKTNO75072 461 aa8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 MFAP1P55081 439 aaKnown RBP8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 PCBP3P57721 371 aaKnown RBP8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 LRRFIP1Q32MZ4 808 aaKnown RBP8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 NBPF12Q5TAG4 269 aaPredicted RBP8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 CDCP2Q5VXM1 449 aa8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 GGT6Q6P531 493 aa8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 RNF111Q6ZNA4 994 aa8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 USP48Q86UV5 1035 aa8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 ANKLE2Q86XL3 938 aa8.01□□□□□ -1.13
NANOGP9-201ENST00000439890 REXO1Q8N1G1 1221 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms