RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 RRP12Q5JTH9 1297 aaKnown RBP19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 AKNAD1Q5T1N1 836 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 C1orf53Q5VUE5 145 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 SLC39A5Q6ZMH5 540 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 RASGRP2Q7LDG7 609 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 RNF180Q86T96 592 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 FGD4Q96M96 766 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 HOMER2Q9NSB8 354 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 PHF24Q9UPV7 400 aa19.21■□□□□ 0.67
SNRPD3-204ENST00000439775 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 ADCYAP1R1P41586 468 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 NT5C2P49902 561 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 MFSD6Q6ZSS7 791 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 TBC1D10CQ8IV04 446 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 TDHQ8IZJ6 230 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 AGBL1Q96MI9 1066 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 UBE2OQ9C0C9 1292 aaKnown RBP19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 RNF41Q9H4P4 317 aaPredicted RBP19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 DIAPH3Q9NSV4 1193 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 RNF146Q9NTX7 359 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 PRR12Q9ULL5 1215 aa19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
SNRPD3-204ENST00000439775 LAMA4Q16363 1823 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 SOX1O00570 391 aaPredicted RBP19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 ADAMTS4O75173 837 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 PGK1P00558 417 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 CCDC96Q2M329 555 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 CWC27Q6UX04 472 aaKnown RBP19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 BTNL9Q6UXG8 535 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 FAM133AQ8N9E0 248 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 CHMP4CQ96CF2 233 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 TMEM47Q9BQJ4 181 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 ABHD16BQ9H3Z7 469 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 A1CFQ9NQ94 594 aaKnown RBP19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 FAM184BQ9ULE4 1060 aa19.19■□□□□ 0.66
SNRPD3-204ENST00000439775 ACVR2BQ13705 512 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 LRIT3Q3SXY7 679 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 ARMCX2Q7L311 632 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 LENG1Q96BZ8 264 aaPredicted RBP19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 TTC14Q96N46 770 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 TRERF1Q96PN7 1200 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 RANBP17Q9H2T7 1088 aaKnown RBP19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 PRKAG2Q9UGJ0 569 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 ZHX1Q9UKY1 873 aaPredicted RBP19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 MTMR7Q9Y216 660 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 ATP11BQ9Y2G3 1177 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 SYNRGQ9UMZ2 1314 aa19.18■□□□□ 0.66
SNRPD3-204ENST00000439775 POTEB2H3BUK9 544 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 ZNF213O14771 459 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 DUSP11O75319 330 aaKnown RBP19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 ICAM1P05362 532 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 ALAS1P13196 640 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 MDM2Q00987 491 aaPredicted RBP19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 TRIM60Q495X7 471 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 CCDC174Q6PII3 467 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 ESR2Q92731 530 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 LBHD1Q9BQE6 289 aaPredicted RBP19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 TSEN34Q9BSV6 310 aaKnown RBP19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 DSCC1Q9BVC3 393 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 NEDD4P46934 1319 aa19.17■□□□□ 0.66
SNRPD3-204ENST00000439775 A0A1W2PQ45 241 aaPredicted RBP19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 A0A1W2PQY0 241 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 PDHBP11177 359 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 SYDE2Q5VT97 1194 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 GPR153Q6NV75 609 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 CCDC144CPQ8IYA2 1237 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 FERMT2Q96AC1 680 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 KATNBL1Q9H079 304 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 CCPG1Q9ULG6 757 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 LTBP2Q14767 1821 aa19.16■□□□□ 0.66
SNRPD3-204ENST00000439775 SMCHD1A6NHR9 2005 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 MOXD2PA6NHM9 499 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 ASB14A6NK59 587 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 SNHG28P0DPA3 235 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 CST5P28325 142 aaPredicted RBP19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 SNAP25P60880 206 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 CNTN2Q02246 1040 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 CCDC144BQ3MJ40 725 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 TTBK2Q6IQ55 1244 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 KLHDC9Q8NEP7 349 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 LRCH3Q96II8 777 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 PDLIM7Q9NR12 457 aa19.15■□□□□ 0.66
SNRPD3-204ENST00000439775 ADCY6O43306 1168 aa19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 SLC16A2P36021 539 aa19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 ACLYP53396 1101 aa19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 ZNF543Q08ER8 600 aa19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 MUM1L1Q5H9M0 696 aa19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 CCSAPQ6IQ19 270 aaPredicted RBP19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 DGKHQ86XP1 1220 aa19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 UPF3AQ9H1J1 476 aaKnown RBP19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 CYP39A1Q9NYL5 469 aa19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 PNMA2Q9UL42 364 aa19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 FRMPD2Q68DX3 1309 aaPredicted RBP19.14■□□□□ 0.65
SNRPD3-204ENST00000439775 SOWAHBA6NEL2 793 aa19.13■□□□□ 0.65
SNRPD3-204ENST00000439775 PDE4AP27815 886 aa19.13■□□□□ 0.65
SNRPD3-204ENST00000439775 CCDC178Q5BJE1 867 aa19.13■□□□□ 0.65
SNRPD3-204ENST00000439775 IQCA1Q86XH1 822 aa19.13■□□□□ 0.65
SNRPD3-204ENST00000439775 NUP133Q8WUM0 1156 aa19.13■□□□□ 0.65
SNRPD3-204ENST00000439775 CTNNA3Q9UI47 895 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms