RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 ADCYAP1R1P41586 468 aa23.98■■□□□ 1.43
NCKIPSD-206ENST00000439518 AKNAD1Q5T1N1 836 aa23.98■■□□□ 1.43
NCKIPSD-206ENST00000439518 SLC39A5Q6ZMH5 540 aa23.98■■□□□ 1.43
NCKIPSD-206ENST00000439518 DCAF4Q8WV16 495 aa23.98■■□□□ 1.43
NCKIPSD-206ENST00000439518 AGBL1Q96MI9 1066 aa23.98■■□□□ 1.43
NCKIPSD-206ENST00000439518 HOMER2Q9NSB8 354 aa23.98■■□□□ 1.43
NCKIPSD-206ENST00000439518 MYCNP04198 464 aaPredicted RBP23.97■■□□□ 1.43
NCKIPSD-206ENST00000439518 TOP1P11387 765 aaKnown RBP23.97■■□□□ 1.43
NCKIPSD-206ENST00000439518 RTP1P59025 263 aa23.97■■□□□ 1.43
NCKIPSD-206ENST00000439518 SNX17Q15036 470 aa23.97■■□□□ 1.43
NCKIPSD-206ENST00000439518 CWC27Q6UX04 472 aaKnown RBP23.97■■□□□ 1.43
NCKIPSD-206ENST00000439518 TBC1D10CQ8IV04 446 aa23.97■■□□□ 1.43
NCKIPSD-206ENST00000439518 TMEM47Q9BQJ4 181 aa23.97■■□□□ 1.43
NCKIPSD-206ENST00000439518 ACAD9Q9H845 621 aa23.97■■□□□ 1.43
NCKIPSD-206ENST00000439518 SOX1O00570 391 aaPredicted RBP23.96■■□□□ 1.43
NCKIPSD-206ENST00000439518 PGK1P00558 417 aa23.96■■□□□ 1.43
NCKIPSD-206ENST00000439518 TKFCQ3LXA3 575 aa23.96■■□□□ 1.43
NCKIPSD-206ENST00000439518 MFSD6Q6ZSS7 791 aa23.96■■□□□ 1.43
NCKIPSD-206ENST00000439518 DIAPH3Q9NSV4 1193 aa23.96■■□□□ 1.43
NCKIPSD-206ENST00000439518 RNF146Q9NTX7 359 aa23.96■■□□□ 1.43
NCKIPSD-206ENST00000439518 PHF24Q9UPV7 400 aa23.96■■□□□ 1.43
NCKIPSD-206ENST00000439518 MTMR7Q9Y216 660 aa23.96■■□□□ 1.43
NCKIPSD-206ENST00000439518 HIP1O00291 1037 aa23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 SNAP25P60880 206 aa23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 CNTN2Q02246 1040 aa23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 BTNL9Q6UXG8 535 aa23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 RNF180Q86T96 592 aa23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 FAM133AQ8N9E0 248 aa23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 FERMT2Q96AC1 680 aa23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 LENG1Q96BZ8 264 aaPredicted RBP23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 A1CFQ9NQ94 594 aaKnown RBP23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 FAM184BQ9ULE4 1060 aa23.95■■□□□ 1.42
NCKIPSD-206ENST00000439518 ADAMTS4O75173 837 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 ACVR2BQ13705 512 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 CCDC96Q2M329 555 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 C1orf53Q5VUE5 145 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 TTBK2Q6IQ55 1244 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 TTC14Q96N46 770 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 TRERF1Q96PN7 1200 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 UBE2OQ9C0C9 1292 aaKnown RBP23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 ABHD16BQ9H3Z7 469 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 RNF41Q9H4P4 317 aaPredicted RBP23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 ATP11BQ9Y2G3 1177 aa23.94■■□□□ 1.42
NCKIPSD-206ENST00000439518 POTEB2H3BUK9 544 aa23.93■■□□□ 1.42
NCKIPSD-206ENST00000439518 ALAS1P13196 640 aa23.93■■□□□ 1.42
NCKIPSD-206ENST00000439518 PDE4AP27815 886 aa23.93■■□□□ 1.42
NCKIPSD-206ENST00000439518 CCDC174Q6PII3 467 aa23.93■■□□□ 1.42
NCKIPSD-206ENST00000439518 TDHQ8IZJ6 230 aa23.93■■□□□ 1.42
NCKIPSD-206ENST00000439518 ZHX1Q9UKY1 873 aaPredicted RBP23.93■■□□□ 1.42
NCKIPSD-206ENST00000439518 NEDD4P46934 1319 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 ZNF213O14771 459 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 ICAM1P05362 532 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 SLC16A2P36021 539 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 MDM2Q00987 491 aaPredicted RBP23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 TRIM60Q495X7 471 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 ARMCX2Q7L311 632 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 CCDC144CPQ8IYA2 1237 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 ESR2Q92731 530 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 LRCH3Q96II8 777 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 DSCC1Q9BVC3 393 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 KATNBL1Q9H079 304 aa23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 RANBP17Q9H2T7 1088 aaKnown RBP23.92■■□□□ 1.42
NCKIPSD-206ENST00000439518 SYNRGQ9UMZ2 1314 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 MCM3APO60318 1980 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 SOWAHBA6NEL2 793 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 DUSP11O75319 330 aaKnown RBP23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 PDHBP11177 359 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 NT5C2P49902 561 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 LRIT3Q3SXY7 679 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 MUM1L1Q5H9M0 696 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 SYDE2Q5VT97 1194 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 KLHDC9Q8NEP7 349 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 TSEN34Q9BSV6 310 aaKnown RBP23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 GPCPD1Q9NPB8 672 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 CCPG1Q9ULG6 757 aa23.91■■□□□ 1.42
NCKIPSD-206ENST00000439518 FRMPD2Q68DX3 1309 aaPredicted RBP23.9■■□□□ 1.42
NCKIPSD-206ENST00000439518 ADCY6O43306 1168 aa23.9■■□□□ 1.42
NCKIPSD-206ENST00000439518 SNHG28P0DPA3 235 aa23.9■■□□□ 1.42
NCKIPSD-206ENST00000439518 CCDC144BQ3MJ40 725 aa23.9■■□□□ 1.42
NCKIPSD-206ENST00000439518 CCSAPQ6IQ19 270 aaPredicted RBP23.9■■□□□ 1.42
NCKIPSD-206ENST00000439518 CYP39A1Q9NYL5 469 aa23.9■■□□□ 1.42
NCKIPSD-206ENST00000439518 ASTN1O14525 1302 aa23.89■■□□□ 1.42
NCKIPSD-206ENST00000439518 A0A1W2PQ45 241 aaPredicted RBP23.89■■□□□ 1.41
NCKIPSD-206ENST00000439518 A0A1W2PQY0 241 aa23.89■■□□□ 1.41
NCKIPSD-206ENST00000439518 GSPT1P15170 499 aaKnown RBP23.89■■□□□ 1.41
NCKIPSD-206ENST00000439518 ACLYP53396 1101 aa23.89■■□□□ 1.41
NCKIPSD-206ENST00000439518 ZNF543Q08ER8 600 aa23.89■■□□□ 1.41
NCKIPSD-206ENST00000439518 LBHD1Q9BQE6 289 aaPredicted RBP23.89■■□□□ 1.41
NCKIPSD-206ENST00000439518 PRKAG2Q9UGJ0 569 aa23.89■■□□□ 1.41
NCKIPSD-206ENST00000439518 LAMA4Q16363 1823 aa23.89■■□□□ 1.41
NCKIPSD-206ENST00000439518 IRX6P78412 446 aaPredicted RBP23.88■■□□□ 1.41
NCKIPSD-206ENST00000439518 TLE2Q04725 743 aa23.88■■□□□ 1.41
NCKIPSD-206ENST00000439518 TTC22Q5TAA0 569 aa23.88■■□□□ 1.41
NCKIPSD-206ENST00000439518 DGKHQ86XP1 1220 aa23.88■■□□□ 1.41
NCKIPSD-206ENST00000439518 UPF3AQ9H1J1 476 aaKnown RBP23.88■■□□□ 1.41
NCKIPSD-206ENST00000439518 IL25Q9H293 177 aa23.88■■□□□ 1.41
NCKIPSD-206ENST00000439518 PDLIM7Q9NR12 457 aa23.88■■□□□ 1.41
NCKIPSD-206ENST00000439518 ASB14A6NK59 587 aa23.87■■□□□ 1.41
NCKIPSD-206ENST00000439518 KDM4AO75164 1064 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms