RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 E7EWF7 191 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 IFIT3O14879 490 aaKnown RBP12.25□□□□□ -0.45
MCF2L-216ENST00000439475 SNHG28P0DPA3 235 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 CCND3P30281 292 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-216ENST00000439475 CYP2C19P33261 490 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 SLC16A2P36021 539 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 ZNF792Q3KQV3 632 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 ASPRV1Q53RT3 343 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 TTBK2Q6IQ55 1244 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.25□□□□□ -0.45
MCF2L-216ENST00000439475 DPF3Q92784 378 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 SHISA4Q96DD7 197 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 RANBP17Q9H2T7 1088 aaKnown RBP12.25□□□□□ -0.45
MCF2L-216ENST00000439475 RNF146Q9NTX7 359 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 OGDHLQ9ULD0 1010 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 CCPG1Q9ULG6 757 aa12.25□□□□□ -0.45
MCF2L-216ENST00000439475 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 ICAM1P05362 532 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 PGK2P07205 417 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 PARP1P09874 1014 aaKnown RBP12.24□□□□□ -0.45
MCF2L-216ENST00000439475 WTAPQ15007 396 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-216ENST00000439475 ENAHQ8N8S7 591 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-216ENST00000439475 AGBL1Q96MI9 1066 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 TINF2Q9BSI4 451 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 MTA3Q9BTC8 594 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 HOMER2Q9NSB8 354 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
MCF2L-216ENST00000439475 ZNF236Q9UL36 1845 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 CNPY2Q9Y2B0 182 aa12.24□□□□□ -0.45
MCF2L-216ENST00000439475 PFASO15067 1338 aa12.23□□□□□ -0.45
MCF2L-216ENST00000439475 ZNF536O15090 1300 aa12.23□□□□□ -0.45
MCF2L-216ENST00000439475 DHX16O60231 1041 aaKnown RBP12.23□□□□□ -0.45
MCF2L-216ENST00000439475 PRPF38BQ5VTL8 546 aaKnown RBP12.23□□□□□ -0.45
MCF2L-216ENST00000439475 TMTC2Q8N394 836 aa12.23□□□□□ -0.45
MCF2L-216ENST00000439475 ARRDC4Q8NCT1 418 aa12.23□□□□□ -0.45
MCF2L-216ENST00000439475 PAWRQ96IZ0 340 aaKnown RBP12.23□□□□□ -0.45
MCF2L-216ENST00000439475 LSG1Q9H089 658 aaKnown RBP12.23□□□□□ -0.45
MCF2L-216ENST00000439475 DNAJC25-GNG10A0A024R161 153 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 ASB14A6NK59 587 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 SEPT4O43236 478 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 GOLGA8HP0CJ92 632 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 CYBAP13498 195 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 MCM5P33992 734 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 SNAP25P60880 206 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 NECTIN1Q15223 517 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 SEC23AQ15436 765 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 TMEM67Q5HYA8 995 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 LHX8Q68G74 356 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 CYB5R4Q7L1T6 521 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 CATIPQ7Z7H3 387 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 SKAP1Q86WV1 359 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 C11orf49Q9H6J7 331 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 NR2E3Q9Y5X4 410 aa12.22□□□□□ -0.45
MCF2L-216ENST00000439475 PLXNA1Q9UIW2 1896 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 WDR19Q8NEZ3 1342 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 SYNGAP1Q96PV0 1343 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 B4DLN1 442 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 SLC27A2O14975 620 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 IGHA2P01877 340 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 RARBP10826 455 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 MRPL12P52815 198 aaKnown RBP12.21□□□□□ -0.45
MCF2L-216ENST00000439475 TRAF1Q13077 416 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 PRAMEF19Q5SWL8 479 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 CREB3L3Q68CJ9 461 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 MAMDC4Q6UXC1 1216 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 NSMFQ6X4W1 530 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 RASGRP2Q7LDG7 609 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 UBE2Q1Q7Z7E8 422 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 TMEM87BQ96K49 555 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 MPHOSPH6Q99547 160 aaKnown RBP12.21□□□□□ -0.45
MCF2L-216ENST00000439475 MAF1Q9H063 256 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 ABHD16BQ9H3Z7 469 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 VAT1LQ9HCJ6 419 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 A1CFQ9NQ94 594 aaKnown RBP12.21□□□□□ -0.45
MCF2L-216ENST00000439475 ADD3Q9UEY8 706 aaKnown RBP12.21□□□□□ -0.45
MCF2L-216ENST00000439475 FAM184BQ9ULE4 1060 aa12.21□□□□□ -0.45
MCF2L-216ENST00000439475 AKR1A1P14550 325 aa12.2□□□□□ -0.46
MCF2L-216ENST00000439475 KRT32Q14532 448 aa12.2□□□□□ -0.46
MCF2L-216ENST00000439475 STOX1Q6ZVD7 989 aa12.2□□□□□ -0.46
MCF2L-216ENST00000439475 CHST3Q7LGC8 479 aa12.2□□□□□ -0.46
MCF2L-216ENST00000439475 ADGRF4Q8IZF3 695 aa12.2□□□□□ -0.46
MCF2L-216ENST00000439475 FAM133AQ8N9E0 248 aa12.2□□□□□ -0.46
MCF2L-216ENST00000439475 TRPV1Q8NER1 839 aa12.2□□□□□ -0.46
MCF2L-216ENST00000439475 ABCB11O95342 1321 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 LOC102724159A0A0B4J2E5 919 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 PTPDC1A2A3K4 754 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 CCDC69A6NI79 296 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 KBTBD13C9JR72 458 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 KLRF2D3W0D1 207 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 DNM1LO00429 736 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 PRC1O43663 620 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 EVI5O60447 810 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 REC8O95072 547 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 ACVR2BQ13705 512 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 PWP2Q15269 919 aaKnown RBP12.19□□□□□ -0.46
MCF2L-216ENST00000439475 CDC37Q16543 378 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-216ENST00000439475 MUM1L1Q5H9M0 696 aa12.19□□□□□ -0.46
MCF2L-216ENST00000439475 SYNE3Q6ZMZ3 975 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms