RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 PHF24Q9UPV7 400 aa11.78□□□□□ -0.52
CCDC66-207ENST00000439445 DIS3Q9Y2L1 958 aaKnown RBP11.78□□□□□ -0.52
CCDC66-207ENST00000439445 PLXNA1Q9UIW2 1896 aa11.78□□□□□ -0.52
CCDC66-207ENST00000439445 MYH7P12883 1935 aa11.78□□□□□ -0.52
CCDC66-207ENST00000439445 MINDY4BA8MYZ0 360 aa11.77□□□□□ -0.53
CCDC66-207ENST00000439445 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.53
CCDC66-207ENST00000439445 COPB2P35606 906 aa11.77□□□□□ -0.53
CCDC66-207ENST00000439445 C1orf53Q5VUE5 145 aa11.77□□□□□ -0.53
CCDC66-207ENST00000439445 DDX11Q96FC9 970 aa11.77□□□□□ -0.53
CCDC66-207ENST00000439445 NUP88Q99567 741 aaPredicted RBP11.77□□□□□ -0.53
CCDC66-207ENST00000439445 CDX2Q99626 313 aaPredicted RBP11.77□□□□□ -0.53
CCDC66-207ENST00000439445 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC66-207ENST00000439445 SEMA6BQ9H3T3 888 aa11.77□□□□□ -0.53
CCDC66-207ENST00000439445 ARPP21Q9UBL0 812 aaPredicted RBP11.77□□□□□ -0.53
CCDC66-207ENST00000439445 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
CCDC66-207ENST00000439445 CDH23Q9H251 3354 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 A0A1W2PQ45 241 aaPredicted RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 A0A1W2PQY0 241 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 F5H6K3 240 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 PQBP1O60828 265 aaKnown RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 CLTBP09497 229 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 ZNF865P0CJ78 1059 aaPredicted RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 AKR1A1P14550 325 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 RAG1P15918 1043 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 RASA1P20936 1047 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 KLRC3Q07444 240 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 SBK1Q52WX2 424 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 SNRNP48Q6IEG0 339 aaKnown RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 CPXCR1Q8N123 301 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 PRPF38AQ8NAV1 312 aaKnown RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 REPS2Q8NFH8 660 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 STRBPQ96SI9 672 aaKnown RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 SLF1Q9BQI6 1058 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 COL25A1Q9BXS0 654 aaPredicted RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 TEX13BQ9BXU2 312 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 NYAP2Q9P242 653 aa11.76□□□□□ -0.53
CCDC66-207ENST00000439445 CTDP1Q9Y5B0 961 aaPredicted RBP11.76□□□□□ -0.53
CCDC66-207ENST00000439445 GSG1L2A8MUP6 293 aa11.75□□□□□ -0.53
CCDC66-207ENST00000439445 ITGB8P26012 769 aa11.75□□□□□ -0.53
CCDC66-207ENST00000439445 SMAD3P84022 425 aaKnown RBP11.75□□□□□ -0.53
CCDC66-207ENST00000439445 LENG1Q96BZ8 264 aaPredicted RBP11.75□□□□□ -0.53
CCDC66-207ENST00000439445 TSEN34Q9BSV6 310 aaKnown RBP11.75□□□□□ -0.53
CCDC66-207ENST00000439445 ECHDC1Q9NTX5 307 aa11.75□□□□□ -0.53
CCDC66-207ENST00000439445 TMEM39AQ9NV64 488 aa11.75□□□□□ -0.53
CCDC66-207ENST00000439445 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
CCDC66-207ENST00000439445 FAM184BQ9ULE4 1060 aa11.75□□□□□ -0.53
CCDC66-207ENST00000439445 RIPK3Q9Y572 518 aa11.75□□□□□ -0.53
CCDC66-207ENST00000439445 TTC28Q96AY4 2481 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 DCDC2CA8MYV0 355 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 KIAA0355O15063 1070 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 ZBED4O75132 1171 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 SNAI1O95863 264 aaPredicted RBP11.74□□□□□ -0.53
CCDC66-207ENST00000439445 NDUFB10O96000 172 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 APPP05067 770 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 ACLYP53396 1101 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 EPHB4P54760 987 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 GIMAP6Q6P9H5 292 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 ZNF444Q8N0Y2 327 aaPredicted RBP11.74□□□□□ -0.53
CCDC66-207ENST00000439445 MSL3Q8N5Y2 521 aaKnown RBP11.74□□□□□ -0.53
CCDC66-207ENST00000439445 KBTBD3Q8NAB2 608 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 MAFAQ8NHW3 353 aaPredicted RBP11.74□□□□□ -0.53
CCDC66-207ENST00000439445 NUP133Q8WUM0 1156 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 OSBP2Q969R2 916 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 KIFC2Q96AC6 838 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
CCDC66-207ENST00000439445 TTYH1Q9H313 450 aaPredicted RBP11.74□□□□□ -0.53
CCDC66-207ENST00000439445 STARD7Q9NQZ5 370 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 RCAN3Q9UKA8 241 aa11.74□□□□□ -0.53
CCDC66-207ENST00000439445 ZHX1Q9UKY1 873 aaPredicted RBP11.74□□□□□ -0.53
CCDC66-207ENST00000439445 CHD9Q3L8U1 2897 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 DNAJC25-GNG10A0A024R161 153 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 RNF113AO15541 343 aaKnown RBP11.73□□□□□ -0.53
CCDC66-207ENST00000439445 ADAMTS4O75173 837 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 FPGSQ05932 587 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 FAAP100Q0VG06 881 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 KCNA10Q16322 511 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 ANKRD35Q8N283 1001 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 APPBP2Q92624 585 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 VTI1AQ96AJ9 217 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 GPATCH3Q96I76 525 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 SYNGAP1Q96PV0 1343 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 RAVER2Q9HCJ3 691 aaKnown RBP11.73□□□□□ -0.53
CCDC66-207ENST00000439445 SYNRGQ9UMZ2 1314 aa11.73□□□□□ -0.53
CCDC66-207ENST00000439445 MOXD2PA6NHM9 499 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 ATP2A1O14983 1001 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 GPAA1O43292 621 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 DUSP11O75319 330 aaKnown RBP11.72□□□□□ -0.53
CCDC66-207ENST00000439445 PRDM1O75626 825 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 C6orf222P0C671 652 aaPredicted RBP11.72□□□□□ -0.53
CCDC66-207ENST00000439445 TDO2P48775 406 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 LSM11P83369 360 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC66-207ENST00000439445 ACVR2BQ13705 512 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 C20orf194Q5TEA3 1177 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 ANKRD33Q7Z3H0 272 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 KLHDC9Q8NEP7 349 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms