RNA–Protein interactions for RNA: ENST00000439214.1

SNAP29-202, Transcript of synaptosome associated protein 29, humanhuman

TSL 3

Gene SNAP29, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-202ENST00000439214 MFSD2AQ8NA29 543 aa7.44□□□□□ -1.22
SNAP29-202ENST00000439214 C2CD4AQ8NCU7 369 aaPredicted RBP7.44□□□□□ -1.22
SNAP29-202ENST00000439214 LENG1Q96BZ8 264 aaPredicted RBP7.44□□□□□ -1.22
SNAP29-202ENST00000439214 SLC6A18Q96N87 628 aa7.44□□□□□ -1.22
SNAP29-202ENST00000439214 IPO9Q96P70 1041 aaKnown RBP7.44□□□□□ -1.22
SNAP29-202ENST00000439214 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.44□□□□□ -1.22
SNAP29-202ENST00000439214 C19orf44Q9H6X5 657 aa7.44□□□□□ -1.22
SNAP29-202ENST00000439214 ADAMTS8Q9UP79 889 aa7.44□□□□□ -1.22
SNAP29-202ENST00000439214 LRPPRCP42704 1394 aaKnown RBP7.44□□□□□ -1.22
SNAP29-202ENST00000439214 PRAG1Q86YV5 1406 aa7.44□□□□□ -1.22
SNAP29-202ENST00000439214 LAMC1P11047 1609 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 PPM1GO15355 546 aaPredicted RBP7.43□□□□□ -1.22
SNAP29-202ENST00000439214 LRIG2O94898 1065 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 CST3P01034 146 aaPredicted RBP7.43□□□□□ -1.22
SNAP29-202ENST00000439214 ACRP10323 421 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 HSP90B1P14625 803 aaKnown RBP7.43□□□□□ -1.22
SNAP29-202ENST00000439214 GIMAP7Q8NHV1 300 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 BAHD1Q8TBE0 780 aaPredicted RBP7.43□□□□□ -1.22
SNAP29-202ENST00000439214 SH3TC2Q8TF17 1288 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 WFDC12Q8WWY7 111 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 APPBP2Q92624 585 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 APBA2Q99767 749 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 MKRN2Q9H000 416 aaKnown RBP7.43□□□□□ -1.22
SNAP29-202ENST00000439214 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.43□□□□□ -1.227e-6■■■■■ 27.7
SNAP29-202ENST00000439214 LTBP3Q9NS15 1303 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 PTPRUQ92729 1446 aa7.43□□□□□ -1.22
SNAP29-202ENST00000439214 NKTRP30414 1462 aaKnown RBP7.43□□□□□ -1.22
SNAP29-202ENST00000439214 LRRC7Q96NW7 1537 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 NRXN3Q9Y4C0 1643 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 TIAF1O95411 115 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 NEFMP07197 916 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 NFICP08651 508 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 HSD3B2P26439 372 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 PREPP48147 710 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 TCEAL1Q15170 157 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 NFKBIBQ15653 356 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 NBPF8Q3BBV2 869 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 HEATR6Q6AI08 1181 aaKnown RBP7.42□□□□□ -1.22
SNAP29-202ENST00000439214 ARMCX6Q7L4S7 300 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 HOMER1Q86YM7 354 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 ST13P5Q8NFI4 369 aaPredicted RBP7.42□□□□□ -1.22
SNAP29-202ENST00000439214 CYB5D2Q8WUJ1 264 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 FBLIM1Q8WUP2 373 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 UTP4Q969X6 686 aaKnown RBP7.42□□□□□ -1.22
SNAP29-202ENST00000439214 PUS7Q96PZ0 661 aaKnown RBP7.42□□□□□ -1.22
SNAP29-202ENST00000439214 MIPEPQ99797 713 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 MSRB2Q9Y3D2 182 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 EIF3AQ14152 1382 aaKnown RBP7.42□□□□□ -1.22
SNAP29-202ENST00000439214 ABCC11Q96J66 1382 aa7.42□□□□□ -1.22
SNAP29-202ENST00000439214 CDC45O75419 566 aa7.41□□□□□ -1.22
SNAP29-202ENST00000439214 BMP3P12645 472 aa7.41□□□□□ -1.22
SNAP29-202ENST00000439214 SLBPQ14493 270 aaKnown RBP eCLIP7.41□□□□□ -1.22
SNAP29-202ENST00000439214 TDRD10Q5VZ19 366 aaKnown RBP7.41□□□□□ -1.22
SNAP29-202ENST00000439214 PAOXQ6QHF9 649 aa7.41□□□□□ -1.22
SNAP29-202ENST00000439214 FANCLQ9NW38 375 aa7.41□□□□□ -1.22
SNAP29-202ENST00000439214 SUCOQ9UBS9 1254 aaKnown RBP7.41□□□□□ -1.22
SNAP29-202ENST00000439214 FBXL21Q9UKT6 434 aa7.41□□□□□ -1.22
SNAP29-202ENST00000439214 ZNF214Q9UL59 606 aaPredicted RBP7.41□□□□□ -1.22
SNAP29-202ENST00000439214 TPX2Q9ULW0 747 aaKnown RBP7.41□□□□□ -1.22
SNAP29-202ENST00000439214 SUGT1Q9Y2Z0 365 aa7.41□□□□□ -1.22
SNAP29-202ENST00000439214 CENPJQ9HC77 1338 aaPredicted RBP7.41□□□□□ -1.22
SNAP29-202ENST00000439214 NRXN1Q9ULB1 1477 aa7.41□□□□□ -1.22
SNAP29-202ENST00000439214 STRCP1A6NGW2 1772 aa7.41□□□□□ -1.22
SNAP29-202ENST00000439214 PPP1R12AO14974 1030 aaPredicted RBP7.4□□□□□ -1.22
SNAP29-202ENST00000439214 CYP7A1P22680 504 aa7.4□□□□□ -1.22
SNAP29-202ENST00000439214 ETV3P41162 512 aa7.4□□□□□ -1.22
SNAP29-202ENST00000439214 PMS1P54277 932 aaKnown RBP7.4□□□□□ -1.22
SNAP29-202ENST00000439214 RNF187Q5TA31 235 aaPredicted RBP7.4□□□□□ -1.22
SNAP29-202ENST00000439214 CDH24Q86UP0 819 aa7.4□□□□□ -1.22
SNAP29-202ENST00000439214 LRRC47Q8N1G4 583 aaKnown RBP7.4□□□□□ -1.22
SNAP29-202ENST00000439214 SMARCC1Q92922 1105 aaPredicted RBP7.4□□□□□ -1.22
SNAP29-202ENST00000439214 ZNF512BQ96KM6 892 aaPredicted RBP7.4□□□□□ -1.22
SNAP29-202ENST00000439214 RNPC3Q96LT9 517 aaKnown RBP7.4□□□□□ -1.22
SNAP29-202ENST00000439214 POLR3GLQ9BT43 218 aa7.4□□□□□ -1.22
SNAP29-202ENST00000439214 GBP3Q9H0R5 595 aa7.4□□□□□ -1.22
SNAP29-202ENST00000439214 CEP131Q9UPN4 1083 aa7.4□□□□□ -1.22
SNAP29-202ENST00000439214 NWD1Q149M9 1564 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 PTCH1Q13635 1447 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 NCOA3Q9Y6Q9 1424 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 FAM95CA0A1B0GW59 222 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 ANKRD34BA5PLL1 514 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 NOP56O00567 594 aaKnown RBP7.39□□□□□ -1.23
SNAP29-202ENST00000439214 SUSD5O60279 629 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 MAP4P27816 1152 aaKnown RBP7.39□□□□□ -1.23
SNAP29-202ENST00000439214 ZEB1P37275 1124 aaPredicted RBP7.39□□□□□ -1.23
SNAP29-202ENST00000439214 RNF4P78317 190 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 NOL9Q5SY16 702 aaKnown RBP7.39□□□□□ -1.23
SNAP29-202ENST00000439214 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 LETMD1Q6P1Q0 360 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 SPATC1Q76KD6 591 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 UBE3DQ7Z6J8 389 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 TMEM192Q8IY95 271 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 LILRB2Q8N423 598 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 THAP3Q8WTV1 239 aaPredicted RBP7.39□□□□□ -1.23
SNAP29-202ENST00000439214 EPN3Q9H201 632 aa7.39□□□□□ -1.23
SNAP29-202ENST00000439214 KIAA1210Q9ULL0 1709 aa7.38□□□□□ -1.23
SNAP29-202ENST00000439214 FAM135BQ49AJ0 1406 aa7.38□□□□□ -1.23
SNAP29-202ENST00000439214 PLEKHH1Q9ULM0 1364 aa7.38□□□□□ -1.23
SNAP29-202ENST00000439214 SBNO2Q9Y2G9 1366 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms