RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SNRNP48Q6IEG0 339 aaKnown RBP10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 IFNL3Q8IZI9 196 aa10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 KIFC2Q96AC6 838 aa10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 FSD1Q9BTV5 496 aa10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 TEX13BQ9BXU2 312 aa10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 EPB41L4AQ9HCS5 686 aaPredicted RBP10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 XPNPEP3Q9NQH7 507 aa10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 ZNF214Q9UL59 606 aaPredicted RBP10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 CNPY2Q9Y2B0 182 aa10.92□□□□□ -0.66
AC011228.1-201ENST00000439027 PGK1P00558 417 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 SLC3A2P08195 630 aaKnown RBP10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 PDE4BQ07343 736 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 TRIM60Q495X7 471 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 RNF180Q86T96 592 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 PRPF38AQ8NAV1 312 aaKnown RBP10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 REPS2Q8NFH8 660 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 CEP95Q96GE4 821 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 SEC62Q99442 399 aaKnown RBP10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 NRBP1Q9UHY1 535 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 DIS3Q9Y2L1 958 aaKnown RBP10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 FRMPD3Q5JV73 1810 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 ZNF236Q9UL36 1845 aa10.91□□□□□ -0.66
AC011228.1-201ENST00000439027 TTC41PQ6P2S7 1318 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 A0A0G2JMZ2 1700 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 IGKV6D-41A0A0C4DH26 115 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 TTLL1O95922 423 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 TSPY3P0CV98 308 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 TSPY8P0CW00 308 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 TLE2Q04725 743 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 TTC22Q5TAA0 569 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 NAPBQ9H115 298 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 OSBPL3Q9H4L5 887 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 MTMR4Q9NYA4 1195 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 FEM1BQ9UK73 627 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 ZHX1Q9UKY1 873 aaPredicted RBP10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 RIPK3Q9Y572 518 aa10.9□□□□□ -0.66
AC011228.1-201ENST00000439027 ROBO3Q96MS0 1386 aa10.9□□□□□ -0.67
AC011228.1-201ENST00000439027 COL11A1P12107 1806 aaPredicted RBP10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 ZNF865P0CJ78 1059 aaPredicted RBP10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 BMP3P12645 472 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 AKR1A1P14550 325 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 TFAP4Q01664 338 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 PPARAQ07869 468 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 IKQ13123 557 aaPredicted RBP10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 ANKRD35Q8N283 1001 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 NEDD1Q8NHV4 660 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 PI4K2BQ8TCG2 481 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 BADQ92934 168 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 MKL1Q969V6 931 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 LENG1Q96BZ8 264 aaPredicted RBP10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 MTMR10Q9NXD2 777 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 PHF24Q9UPV7 400 aa10.89□□□□□ -0.67
AC011228.1-201ENST00000439027 TMEM232C9JQI7 657 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 PQBP1O60828 265 aaKnown RBP10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 PPP1R37O75864 691 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 HOXB3P14651 431 aaPredicted RBP10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 GSPT1P15170 499 aaKnown RBP10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 SNX17Q15036 470 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 BMP2KLQ5H9B9 411 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 ZMYM1Q5SVZ6 1142 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 MSL3Q8N5Y2 521 aaKnown RBP10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 GMCL1P1Q8NEA9 526 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 FAM161BQ96MY7 647 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 SLC38A10Q9HBR0 1119 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 PDLIM7Q9NR12 457 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 HOMER2Q9NSB8 354 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 FBXO40Q9UH90 709 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
AC011228.1-201ENST00000439027 COL6A3P12111 3177 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 A0A1W2PQ45 241 aaPredicted RBP10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 A0A1W2PQY0 241 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 TRIM43BA6NCK2 446 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 DLL1O00548 723 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 SNAI1O95863 264 aaPredicted RBP10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 MCCP23508 829 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 CTDSPL2Q05D32 466 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 SHHQ15465 462 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 C9orf50Q5SZB4 431 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 CHST13Q8NET6 341 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 CHURC1Q8WUH1 139 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 TRIM43Q96BQ3 446 aaPredicted RBP10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 STX8Q9UNK0 236 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 MTMR7Q9Y216 660 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 STXBP5LQ9Y2K9 1186 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 TACC3Q9Y6A5 838 aa10.87□□□□□ -0.67
AC011228.1-201ENST00000439027 SYNGAP1Q96PV0 1343 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 LAMA2P24043 3122 aaKnown RBP10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 DNAJC25-GNG10A0A024R161 153 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 TSPY2A6NKD2 308 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms