RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 C6orf222P0C671 652 aaPredicted RBP13.57□□□□□ -0.24
CSTF3-203ENST00000438862 SHMT1P34896 483 aa13.57□□□□□ -0.24
CSTF3-203ENST00000438862 COPB2P35606 906 aa13.57□□□□□ -0.24
CSTF3-203ENST00000438862 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
CSTF3-203ENST00000438862 TMEM132BQ14DG7 1078 aa13.57□□□□□ -0.24
CSTF3-203ENST00000438862 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
CSTF3-203ENST00000438862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.57□□□□□ -0.24
CSTF3-203ENST00000438862 CYP2E1P05181 493 aaPredicted RBP13.56□□□□□ -0.24
CSTF3-203ENST00000438862 MYOGP15173 224 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 CYP7A1P22680 504 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 TMEM67Q5HYA8 995 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 GNASQ5JWF2 1037 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 CCDC158Q5M9N0 1113 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 MAMDC4Q6UXC1 1216 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 PLPP6Q8IY26 295 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 SEZ6LQ9BYH1 1024 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 ADAMTS5Q9UNA0 930 aa13.56□□□□□ -0.24
CSTF3-203ENST00000438862 MYADML2A6NDP7 307 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 RFXAPO00287 272 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 MPHOSPH10O00566 681 aaKnown RBP13.55□□□□□ -0.24
CSTF3-203ENST00000438862 SNAI1O95863 264 aaPredicted RBP13.55□□□□□ -0.24
CSTF3-203ENST00000438862 ALADP13716 330 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 ATP2A2P16615 1042 aaKnown RBP13.55□□□□□ -0.24
CSTF3-203ENST00000438862 STAT3P40763 770 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 GJA9P57773 515 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 NHLH1Q02575 133 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 MTX1Q13505 466 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 ALDH1L2Q3SY69 923 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 TTC39AQ5SRH9 613 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 UPF3AQ9H1J1 476 aaKnown RBP13.55□□□□□ -0.24
CSTF3-203ENST00000438862 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
CSTF3-203ENST00000438862 GPHNQ9NQX3 736 aaPredicted RBP13.55□□□□□ -0.24
CSTF3-203ENST00000438862 WDR46O15213 610 aaKnown RBP13.54□□□□□ -0.24
CSTF3-203ENST00000438862 PLCD1P51178 756 aa13.54□□□□□ -0.24
CSTF3-203ENST00000438862 G3BP1Q13283 466 aaKnown RBP eCLIP13.54□□□□□ -0.24
CSTF3-203ENST00000438862 DSG2Q14126 1118 aa13.54□□□□□ -0.24
CSTF3-203ENST00000438862 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
CSTF3-203ENST00000438862 KIAA1755Q5JYT7 1200 aa13.54□□□□□ -0.24
CSTF3-203ENST00000438862 DMRTA1Q5VZB9 504 aa13.54□□□□□ -0.24
CSTF3-203ENST00000438862 TMED8Q6PL24 325 aaPredicted RBP13.54□□□□□ -0.24
CSTF3-203ENST00000438862 SLC43A3Q8NBI5 491 aa13.54□□□□□ -0.24
CSTF3-203ENST00000438862 ZNF512BQ96KM6 892 aaPredicted RBP13.54□□□□□ -0.24
CSTF3-203ENST00000438862 ARHGEF10LQ9HCE6 1279 aa13.54□□□□□ -0.24
CSTF3-203ENST00000438862 CD320Q9NPF0 282 aa13.54□□□□□ -0.24
CSTF3-203ENST00000438862 ZHX1Q9UKY1 873 aaPredicted RBP13.54□□□□□ -0.24
CSTF3-203ENST00000438862 MYO5AQ9Y4I1 1855 aaKnown RBP13.54□□□□□ -0.24
CSTF3-203ENST00000438862 COL11A1P12107 1806 aaPredicted RBP13.53□□□□□ -0.24
CSTF3-203ENST00000438862 ZBBXA8MT70 800 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 CABYRO75952 493 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
CSTF3-203ENST00000438862 CA3P07451 260 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 PFKMP08237 780 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 CCL23P55773 120 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 NKX3-2P78367 333 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 GABPAQ06546 454 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 ACVR2BQ13705 512 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 TMEM179Q6ZVK1 233 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
CSTF3-203ENST00000438862 HRO43593 1189 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 GNAI3P08754 354 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 PSEN2P49810 448 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 CCDC144BQ3MJ40 725 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 SPICE1Q8N0Z3 855 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 GJD3Q8N144 294 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 DDX11Q96FC9 970 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 MEIS3Q99687 375 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 NOC4LQ9BVI4 516 aaKnown RBP13.52□□□□□ -0.25
CSTF3-203ENST00000438862 CERS4Q9HA82 394 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 GPR108Q9NPR9 543 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 UMODL1Q5DID0 1318 aa13.52□□□□□ -0.25
CSTF3-203ENST00000438862 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
CSTF3-203ENST00000438862 VWA5AO00534 786 aa13.51□□□□□ -0.25
CSTF3-203ENST00000438862 ZAP70P43403 619 aa13.51□□□□□ -0.25
CSTF3-203ENST00000438862 KRT40Q6A162 431 aa13.51□□□□□ -0.25
CSTF3-203ENST00000438862 FAM178BQ8IXR5 827 aa13.51□□□□□ -0.25
CSTF3-203ENST00000438862 PHOSPHO2Q8TCD6 241 aa13.51□□□□□ -0.25
CSTF3-203ENST00000438862 FBXL18Q96ME1 805 aa13.51□□□□□ -0.25
CSTF3-203ENST00000438862 API5Q9BZZ5 524 aaKnown RBP13.51□□□□□ -0.25
CSTF3-203ENST00000438862 PIH1D3Q9NQM4 214 aaKnown RBP13.51□□□□□ -0.25
CSTF3-203ENST00000438862 ZNF214Q9UL59 606 aaPredicted RBP13.51□□□□□ -0.25
CSTF3-203ENST00000438862 DNAJC25-GNG10A0A024R161 153 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
CSTF3-203ENST00000438862 ACTN1P12814 892 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 SIAH1Q8IUQ4 282 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 ARNTL2Q8WYA1 636 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 SLC9A7Q96T83 725 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 WNT8AQ9H1J5 351 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
CSTF3-203ENST00000438862 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.5□□□□□ -0.25
CSTF3-203ENST00000438862 SWAP70Q9UH65 585 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms