RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 SNX12Q9UMY4 172 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 PPP1R37O75864 691 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 PLEKP08567 350 aaPredicted RBP20.15■□□□□ 0.82
KCNC4-204ENST00000438661 IFNAR1P17181 557 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 PRCPP42785 496 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 CARSP49589 748 aaKnown RBP20.15■□□□□ 0.82
KCNC4-204ENST00000438661 ALS2CLQ60I27 953 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 HAUS2Q9NVX0 235 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 AATFQ9NY61 560 aaKnown RBP eCLIP20.15■□□□□ 0.82
KCNC4-204ENST00000438661 RWDD2AQ9UIY3 292 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 ZNF233A6NK53 670 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 PATL2C9JE40 543 aaKnown RBP20.15■□□□□ 0.82
KCNC4-204ENST00000438661 SNCBQ16143 134 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 PTGISQ16647 500 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 SYNE4Q8N205 404 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 MS4A14Q96JA4 679 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 XDHP47989 1333 aa20.15■□□□□ 0.82
KCNC4-204ENST00000438661 C21orf2O43822 256 aa20.14■□□□□ 0.82
KCNC4-204ENST00000438661 VAV2P52735 878 aa20.14■□□□□ 0.82
KCNC4-204ENST00000438661 SH3RF1Q7Z6J0 888 aa20.14■□□□□ 0.82
KCNC4-204ENST00000438661 SPRED3Q2MJR0 410 aa20.14■□□□□ 0.81
KCNC4-204ENST00000438661 TBC1D31Q96DN5 1066 aa20.14■□□□□ 0.81
KCNC4-204ENST00000438661 SPA17Q15506 151 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 PARP9Q8IXQ6 854 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 MMGT1Q8N4V1 131 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 DNAJC7Q99615 494 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 UBAC1Q9BSL1 405 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 RBM12Q9NTZ6 932 aaKnown RBP20.13■□□□□ 0.81
KCNC4-204ENST00000438661 BCCIPQ9P287 314 aaKnown RBP eCLIP20.13■□□□□ 0.81
KCNC4-204ENST00000438661 MAP3K15Q6ZN16 1313 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 TMEM94Q12767 1356 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 MST1RQ04912 1400 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 RASSF9O75901 435 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 GCFC2P16383 781 aaKnown RBP20.13■□□□□ 0.81
KCNC4-204ENST00000438661 PMS1P54277 932 aaKnown RBP20.13■□□□□ 0.81
KCNC4-204ENST00000438661 GUCY2DQ02846 1103 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 HAUS3Q68CZ6 603 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 EMBQ6PCB8 327 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 SPATS2Q86XZ4 545 aaKnown RBP20.13■□□□□ 0.81
KCNC4-204ENST00000438661 CCDC42Q96M95 316 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 EPB41L5Q9HCM4 733 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 GLI3P10071 1580 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 WDR19Q8NEZ3 1342 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 IRF2BP1Q8IU81 584 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 OSBPL9Q96SU4 736 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.13■□□□□ 0.81
KCNC4-204ENST00000438661 CAPN11Q9UMQ6 739 aa20.13■□□□□ 0.81
KCNC4-204ENST00000438661 MYH10P35580 1976 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 OPLAHO14841 1288 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 EPB41P11171 864 aaKnown RBP20.12■□□□□ 0.81
KCNC4-204ENST00000438661 EZRP15311 586 aaKnown RBP20.12■□□□□ 0.81
KCNC4-204ENST00000438661 GBP2P32456 591 aaPredicted RBP20.12■□□□□ 0.81
KCNC4-204ENST00000438661 CYB5D1Q6P9G0 228 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 FAXDC2Q96IV6 333 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 TRIM47Q96LD4 638 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 PLIN2Q99541 437 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 TJP1Q07157 1748 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 TACC1O75410 805 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 GLI1P08151 1106 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 BRD2P25440 801 aaKnown RBP20.12■□□□□ 0.81
KCNC4-204ENST00000438661 PAFAH1B1P43034 410 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 MCAMP43121 646 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 TRADDQ15628 312 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 TYW1BQ6NUM6 668 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 NOC3LQ8WTT2 800 aaKnown RBP20.12■□□□□ 0.81
KCNC4-204ENST00000438661 MTRQ99707 1265 aa20.12■□□□□ 0.81
KCNC4-204ENST00000438661 ANO9A1A5B4 782 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 DEXIO95424 95 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 PTGDRQ13258 359 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 CRACR2BQ8N4Y2 399 aaPredicted RBP20.11■□□□□ 0.81
KCNC4-204ENST00000438661 RASSF8Q8NHQ8 419 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 MAGEC2Q9UBF1 373 aaPredicted RBP20.11■□□□□ 0.81
KCNC4-204ENST00000438661 KIF1AQ12756 1690 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 C4AP0C0L4 1744 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 C4BP0C0L5 1744 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 ATF3P18847 181 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 MDH1P40925 334 aaKnown RBP20.11■□□□□ 0.81
KCNC4-204ENST00000438661 KDM7AQ6ZMT4 941 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 SGMS1Q86VZ5 419 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 ZCRB1Q8TBF4 217 aaKnown RBP20.11■□□□□ 0.81
KCNC4-204ENST00000438661 ISCA1Q9BUE6 129 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 ZNF532Q9HCE3 1301 aa20.11■□□□□ 0.81
KCNC4-204ENST00000438661 A6NNZ2 444 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 ERCC3P19447 782 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 TBC1D8BQ0IIM8 1120 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 WTAPQ15007 396 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 TUBB8Q3ZCM7 444 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 TEX11Q8IYF3 940 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 IFIH1Q9BYX4 1025 aaKnown RBP20.1■□□□□ 0.81
KCNC4-204ENST00000438661 NAPBQ9H115 298 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 ALS2Q96Q42 1657 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 NUTM2BA6NNL0 878 aaPredicted RBP20.1■□□□□ 0.81
KCNC4-204ENST00000438661 LGALS16A8MUM7 142 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 NUTM2EB1AL46 878 aaPredicted RBP20.1■□□□□ 0.81
KCNC4-204ENST00000438661 DNM1LO00429 736 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 ZNF263O14978 683 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 IFIT5Q13325 482 aaKnown RBP20.1■□□□□ 0.81
KCNC4-204ENST00000438661 TCIRG1Q13488 830 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 FAM228AQ86W67 206 aa20.1■□□□□ 0.81
KCNC4-204ENST00000438661 TPX2Q9ULW0 747 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms