RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 TLR2O60603 784 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 CRHR2Q13324 411 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 BECN1Q14457 450 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 NTRK3Q16288 839 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 FAM110CQ1W6H9 321 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 NBPF11Q86T75 865 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 HOMER1Q86YM7 354 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 CCDC83Q8IWF9 413 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 CMTR1Q8N1G2 835 aaKnown RBP12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 CCDC82Q8N4S0 544 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 LLPHQ9BRT6 129 aaKnown RBP12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 PAGR1Q9BTK6 254 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 TEX13BQ9BXU2 312 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 JMJD4Q9H9V9 463 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 VAT1LQ9HCJ6 419 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
HLA-DMB-259ENST00000438510 SMCHD1A6NHR9 2005 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZNFX1Q9P2E3 1918 aaKnown RBP12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 PNMA6FA0A0J9YX94 578 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 PRPF3O43395 683 aaKnown RBP12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 ICAM1P05362 532 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 COPB2P35606 906 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 ANP32AP39687 249 aaKnown RBP12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 ERVK-24P63145 666 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 CCNA1P78396 465 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 SSRP1Q08945 709 aaKnown RBP12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 FUT2Q10981 343 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 CCDC174Q6PII3 467 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 MTMR8Q96EF0 704 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 PIGSQ96S52 555 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 MORF4L1Q9UBU8 362 aa12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
HLA-DMB-259ENST00000438510 PLXNA1Q9UIW2 1896 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZNF236Q9UL36 1845 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 hCG_1984214I3L0E3 225 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 TRPA1O75762 1119 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 DEXIO95424 95 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 BCRP11274 1271 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 HMGN5P82970 282 aaKnown RBP12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 PLS1Q14651 629 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 TMEM132BQ14DG7 1078 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 SLC35G1Q2M3R5 365 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 COL13A1Q5TAT6 717 aaPredicted RBP12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 SNRNP48Q6IEG0 339 aaKnown RBP12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 CPXCR1Q8N123 301 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 ANKRD13CQ8N6S4 541 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZNF713Q8N859 430 aaPredicted RBP12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 GPRC5AQ8NFJ5 357 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 WASF1Q92558 559 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 PHKBQ93100 1093 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 AMNQ9BXJ7 453 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 SPATC1LQ9H0A9 340 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 BTBD7Q9P203 1132 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 RBPJLQ9UBG7 517 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZNF214Q9UL59 606 aaPredicted RBP12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 CCPG1Q9ULG6 757 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 KIF3AQ9Y496 699 aa12.21□□□□□ -0.45
HLA-DMB-259ENST00000438510 ZNF536O15090 1300 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 ABCB11O95342 1321 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 PTPDC1A2A3K4 754 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 CNMDO75829 334 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 SLC25A27O95847 323 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 SCG2P13521 617 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 STAT3P40763 770 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 ST3GAL1Q11201 340 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 CUL4AQ13619 759 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 TKFCQ3LXA3 575 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 C17orf99Q6UX52 265 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 RIOX2Q8IUF8 465 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 CCAR1Q8IX12 1150 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 PIBF1Q8WXW3 757 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 RAVER2Q9HCJ3 691 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 CPA4Q9UI42 421 aa12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-259ENST00000438510 CASP8AP2Q9UKL3 1982 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 ZSWIM8A7E2V4 1837 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 CTDNEP1O95476 244 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 TBC1D8O95759 1140 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 SNAP25P60880 206 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 PFKFB3Q16875 520 aaPredicted RBP12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 USH1GQ495M9 461 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 NOM1Q5C9Z4 860 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 PPP1R18Q6NYC8 613 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 SHCBP1Q8NEM2 672 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 SMARCC2Q8TAQ2 1214 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 CCDC12Q8WUD4 166 aaPredicted RBP12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 MROH8Q9H579 483 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 TXNRD2Q9NNW7 524 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms