RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MYL1P05976 194 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 TCP11X2Q5H9J9 407 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 IPO4Q8TEX9 1081 aaKnown RBP7.42□□□□□ -1.22
CSDE1-205ENST00000438362 P2RX5Q93086 422 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 CCDC114Q96M63 670 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 SLC39A2Q9NP94 309 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 PCDHA4Q9UN74 947 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 MRFAP1Q9Y605 127 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 LAD1O00515 517 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 CEP104O60308 925 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 EIF6P56537 245 aaKnown RBP7.42□□□□□ -1.22
CSDE1-205ENST00000438362 RPS6KA1Q15418 735 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 ARL6IP4Q66PJ3 421 aaKnown RBP7.42□□□□□ -1.22
CSDE1-205ENST00000438362 HAUS3Q68CZ6 603 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 NELFCDQ8IXH7 590 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 KLHL7Q8IXQ5 586 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 MYOCDQ8IZQ8 938 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 EYA3Q99504 573 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 ZCCHC17Q9NP64 241 aaKnown RBP7.42□□□□□ -1.22
CSDE1-205ENST00000438362 TBC1D7Q9P0N9 293 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 BIN2Q9UBW5 565 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-205ENST00000438362 RIPOR2Q9Y4F9 1068 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 GSG1L2A8MUP6 293 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GNPATO15228 680 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 RNF40O75150 1001 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 EPB41P11171 864 aaKnown RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 ZBED6P86452 979 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 TMEM132AQ24JP5 1023 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 NCAPH2Q6IBW4 605 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 TRMT1LQ7Z2T5 733 aaKnown RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 CCDC24Q8N4L8 307 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 ANKRD13CQ8N6S4 541 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 AK8Q96MA6 479 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 ZC3H12CQ9C0D7 883 aaKnown RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 L2HGDHQ9H9P8 463 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 ZMYND10O75800 440 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GOLGA8HP0CJ92 632 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GNGT1P63211 74 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 RUFY4Q6ZNE9 571 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 TMTC3Q6ZXV5 915 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 CCDC170Q8IYT3 715 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 ANKS4BQ8N8V4 417 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 BCAS4Q8TDM0 211 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 IGDCC4Q8TDY8 1250 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 NSRP1Q9H0G5 558 aaKnown RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GLT8D2Q9H1C3 349 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 ABHD10Q9NUJ1 306 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 FBXO2Q9UK22 296 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 HPS5Q9UPZ3 1129 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GDAQ9Y2T3 454 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 RRP15Q9Y3B9 282 aaKnown RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 DIP2BQ9P265 1576 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GOLGA8KD6RF30 607 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 UFL1O94874 794 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 CCNE1P24864 410 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GUCY1A2P33402 732 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 GYS2P54840 703 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 MTF1Q14872 753 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 FMNL3Q8IVF7 1028 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 HINFPQ9BQA5 517 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 THAP9Q9H5L6 903 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 SAMM50Q9Y512 469 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 MROH7-TTC4A0A0A0MT08 1334 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 IFT172Q9UG01 1749 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 LOC102724428A0A0B4J2F2 783 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 FLOT1O75955 427 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 CALRP27797 417 aaKnown RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 CRKLP46109 303 aaKnown RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 SIK1P57059 783 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 FMR1Q06787 632 aaKnown RBP eCLIP7.41□□□□□ -1.229e-7■■■■■ 28.1
CSDE1-205ENST00000438362 RAD51AP2Q09MP3 1159 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 CUL4BQ13620 913 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 SELENOSQ9BQE4 189 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 CAPS2Q9BXY5 557 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 AGXT2Q9BYV1 514 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 NT5C3AQ9H0P0 336 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 STMN4Q9H169 189 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 ST7Q9NRC1 585 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 MTRF1LQ9UGC7 380 aaKnown RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-205ENST00000438362 SPATA31A3Q5VYP0 1347 aa7.41□□□□□ -1.22
CSDE1-205ENST00000438362 VGLL3A8MV65 326 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 BUB1O43683 1085 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 GNA14O95837 355 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 HMGB2P26583 209 aaKnown RBP7.4□□□□□ -1.22
CSDE1-205ENST00000438362 MAP3K9P80192 1104 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 SUSD4Q5VX71 490 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 FNBP4Q8N3X1 1017 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-205ENST00000438362 MB21D1Q8N884 522 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 ENAHQ8N8S7 591 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-205ENST00000438362 CNBD1Q8NA66 436 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 NAP1L3Q99457 506 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-205ENST00000438362 LSM14BQ9BX40 385 aaKnown RBP7.4□□□□□ -1.22
CSDE1-205ENST00000438362 PLA2G12BQ9BX93 195 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 IRX2Q9BZI1 471 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-205ENST00000438362 PLEKHA4Q9H4M7 779 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 DISC1Q9NRI5 854 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 A0A1B0GTH6 734 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 SMIM23A6NLE4 172 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms