RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 CCDC102AQ96A19 550 aa18.79■□□□□ 0.6
TTC3-209ENST00000438055 LIMA1Q9UHB6 759 aaKnown RBP18.79■□□□□ 0.6
TTC3-209ENST00000438055 C6orf50Q9HD87 102 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 PCDHA6Q9UN73 950 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 PCDHA8Q9Y5H6 950 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 C6orf229H3BNL8 230 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 PLCG1P19174 1290 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 GRIK5Q16478 980 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 SBK1Q52WX2 424 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 BTDP43251 543 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 TRIM14Q14142 442 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 NONOQ15233 471 aaKnown RBP eCLIP18.78■□□□□ 0.65e-9■■■■□ 22.3
TTC3-209ENST00000438055 CNBD1Q8NA66 436 aa18.78■□□□□ 0.6
TTC3-209ENST00000438055 RRP36Q96EU6 259 aaKnown RBP18.78■□□□□ 0.6
TTC3-209ENST00000438055 PHACTR2O75167 634 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 TNNT3P45378 269 aaPredicted RBP18.77■□□□□ 0.6
TTC3-209ENST00000438055 PMS1P54277 932 aaKnown RBP18.77■□□□□ 0.6
TTC3-209ENST00000438055 NCAPH2Q6IBW4 605 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 NEK11Q8NG66 645 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 FGRP09769 529 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 DYMQ7RTS9 669 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 HPS3Q969F9 1004 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 CALML4Q96GE6 196 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
TTC3-209ENST00000438055 SASH3O75995 380 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 ARHGEF1Q92888 912 aaKnown RBP18.76■□□□□ 0.59
TTC3-209ENST00000438055 DRC1Q96MC2 740 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 FRMPD2Q68DX3 1309 aaPredicted RBP18.76■□□□□ 0.59
TTC3-209ENST00000438055 KDM4FA0A1W2PPD8 638 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 MACROD2A1Z1Q3 448 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 NDUFA10O95299 355 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 TBC1D8O95759 1140 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 GRM4Q14833 912 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 TXNRD1Q16881 649 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 HSP90B2PQ58FF3 399 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 NOC4LQ9BVI4 516 aaKnown RBP18.76■□□□□ 0.59
TTC3-209ENST00000438055 DEF6Q9H4E7 631 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 RPS6KA4O75676 772 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 OR52Z1P0C646 297 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 ADSSL1Q8N142 457 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 MB21D1Q8N884 522 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 TUBGCP2Q9BSJ2 902 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 MAD2L2Q9UI95 211 aa18.76■□□□□ 0.59
TTC3-209ENST00000438055 ZRANB2O95218 330 aaKnown RBP eCLIP18.75■□□□□ 0.59
TTC3-209ENST00000438055 GNA11P29992 359 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 PBX1P40424 430 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 LMAN1P49257 510 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 FKBP15Q5T1M5 1219 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 SLC39A2Q9NP94 309 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 CYTH3O43739 400 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 SLC10A5Q5PT55 438 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 PIGSQ96S52 555 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 JADE2Q9NQC1 790 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 BARHL2Q9NY43 387 aa18.75■□□□□ 0.59
TTC3-209ENST00000438055 TNNI2P48788 182 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 TRAPPC3LQ5T215 181 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 RSRC2Q7L4I2 434 aaKnown RBP18.74■□□□□ 0.59
TTC3-209ENST00000438055 HINFPQ9BQA5 517 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 GPCPD1Q9NPB8 672 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 HDAC6Q9UBN7 1215 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 MYO6Q9UM54 1294 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 NAP1L1P55209 391 aaKnown RBP18.74■□□□□ 0.59
TTC3-209ENST00000438055 TBCKQ8TEA7 893 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 SUGCTQ9HAC7 445 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 A0A0U1RQG5 324 aaPredicted RBP18.74■□□□□ 0.59
TTC3-209ENST00000438055 FCER1AP12319 257 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 CDK8P49336 464 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 AMPD3Q01432 767 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 CYP27A1Q02318 531 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 MFSD14BQ5SR56 506 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 KRT25Q7Z3Z0 450 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 MMRN2Q9H8L6 949 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 SH3GLB2Q9NR46 395 aa18.74■□□□□ 0.59
TTC3-209ENST00000438055 ITIH6Q6UXX5 1313 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 CCDC151A5D8V7 595 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 LGALS16A8MUM7 142 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 CYLC1P35663 651 aaPredicted RBP18.73■□□□□ 0.59
TTC3-209ENST00000438055 NEK8Q86SG6 692 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 REXO1Q8N1G1 1221 aaKnown RBP18.73■□□□□ 0.59
TTC3-209ENST00000438055 LRRC47Q8N1G4 583 aaKnown RBP18.73■□□□□ 0.59
TTC3-209ENST00000438055 CNOT6LQ96LI5 555 aaKnown RBP18.73■□□□□ 0.59
TTC3-209ENST00000438055 GDAP1L1Q96MZ0 367 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 VPS18Q9P253 973 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 POTEB2H3BUK9 544 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 STXBP3O00186 592 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 NAALADL2Q58DX5 795 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 ZHX3Q9H4I2 956 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 PDE11AQ9HCR9 933 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 MPHOSPH10O00566 681 aaKnown RBP18.73■□□□□ 0.59
TTC3-209ENST00000438055 RIMBP2O15034 1052 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 SRGAP2O75044 1071 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 EIF3JO75822 258 aaKnown RBP18.73■□□□□ 0.59
TTC3-209ENST00000438055 KLK7P49862 253 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 BRD3Q15059 726 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 SPA17Q15506 151 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
TTC3-209ENST00000438055 FAM207AQ9NSI2 230 aaPredicted RBP18.73■□□□□ 0.59
TTC3-209ENST00000438055 CHD4Q14839 1912 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms