RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 ZBTB5O15062 677 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 DHX16O60231 1041 aaKnown RBP21.12■□□□□ 0.97
IRF1-203ENST00000437654 ST18O60284 1047 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 TMTC3Q6ZXV5 915 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.12■□□□□ 0.97
IRF1-203ENST00000437654 ABRAQ8N0Z2 381 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 CPXCR1Q8N123 301 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 CHST13Q8NET6 341 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 COA7Q96BR5 231 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 RAVER2Q9HCJ3 691 aaKnown RBP21.12■□□□□ 0.97
IRF1-203ENST00000437654 NAP1L2Q9ULW6 460 aaPredicted RBP21.12■□□□□ 0.97
IRF1-203ENST00000437654 HPS5Q9UPZ3 1129 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 PARP14Q460N5 1801 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 A0A0G2JMZ2 1700 aa21.12■□□□□ 0.97
IRF1-203ENST00000437654 PNMA6FA0A0J9YX94 578 aa21.11■□□□□ 0.97
IRF1-203ENST00000437654 FMNL1O95466 1100 aaPredicted RBP21.11■□□□□ 0.97
IRF1-203ENST00000437654 ERCC3P19447 782 aa21.11■□□□□ 0.97
IRF1-203ENST00000437654 RXRAP19793 462 aa21.11■□□□□ 0.97
IRF1-203ENST00000437654 SNRNP48Q6IEG0 339 aaKnown RBP21.11■□□□□ 0.97
IRF1-203ENST00000437654 SRBD1Q8N5C6 995 aaKnown RBP21.11■□□□□ 0.97
IRF1-203ENST00000437654 CD99L2Q8TCZ2 262 aa21.11■□□□□ 0.97
IRF1-203ENST00000437654 RRP36Q96EU6 259 aaKnown RBP21.11■□□□□ 0.97
IRF1-203ENST00000437654 VAT1LQ9HCJ6 419 aa21.11■□□□□ 0.97
IRF1-203ENST00000437654 FAM217BQ9NTX9 383 aaPredicted RBP21.11■□□□□ 0.97
IRF1-203ENST00000437654 LIMCH1Q9UPQ0 1083 aa21.11■□□□□ 0.97
IRF1-203ENST00000437654 TNPO2O14787 897 aaKnown RBP21.1■□□□□ 0.97
IRF1-203ENST00000437654 CYTH3O43739 400 aa21.1■□□□□ 0.97
IRF1-203ENST00000437654 MCM2P49736 904 aa21.1■□□□□ 0.97
IRF1-203ENST00000437654 PKN2Q16513 984 aaKnown RBP21.1■□□□□ 0.97
IRF1-203ENST00000437654 CDC37Q16543 378 aaPredicted RBP21.1■□□□□ 0.97
IRF1-203ENST00000437654 PLEKHH3Q7Z736 793 aa21.1■□□□□ 0.97
IRF1-203ENST00000437654 CCDC144CPQ8IYA2 1237 aa21.1■□□□□ 0.97
IRF1-203ENST00000437654 ZSCAN31Q96LW9 406 aaPredicted RBP21.1■□□□□ 0.97
IRF1-203ENST00000437654 AMNQ9BXJ7 453 aa21.1■□□□□ 0.97
IRF1-203ENST00000437654 PORCNQ9H237 461 aa21.1■□□□□ 0.97
IRF1-203ENST00000437654 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
IRF1-203ENST00000437654 EFCC1Q9HA90 598 aa21.1■□□□□ 0.97
IRF1-203ENST00000437654 RBM27Q9P2N5 1060 aaKnown RBP21.1■□□□□ 0.97
IRF1-203ENST00000437654 IVNS1ABPQ9Y6Y0 642 aa21.1■□□□□ 0.97
IRF1-203ENST00000437654 CCDC174Q6PII3 467 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 CPLX2Q6PUV4 134 aaKnown RBP21.09■□□□□ 0.97
IRF1-203ENST00000437654 GPR142Q7Z601 462 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 NBPF11Q86T75 865 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 NCAPG2Q86XI2 1143 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 TRIM47Q96LD4 638 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 AGBL1Q96MI9 1066 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 CPVLQ9H3G5 476 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 CWC22Q9HCG8 908 aaKnown RBP21.09■□□□□ 0.97
IRF1-203ENST00000437654 SEC63Q9UGP8 760 aaKnown RBP21.09■□□□□ 0.97
IRF1-203ENST00000437654 CCPG1Q9ULG6 757 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 TPCN1Q9ULQ1 816 aa21.09■□□□□ 0.97
IRF1-203ENST00000437654 SLC15A5A6NIM6 579 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 PEX10O60683 326 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 PFKFB2O60825 505 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 PLEKHA8P1O95397 391 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 PTPREP23469 700 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 CDC27P30260 824 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 ADD1P35611 737 aaKnown RBP21.08■□□□□ 0.97
IRF1-203ENST00000437654 FUT2Q10981 343 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 QRICH1Q2TAL8 776 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 CTU1Q7Z7A3 348 aaKnown RBP21.08■□□□□ 0.97
IRF1-203ENST00000437654 FBXO11Q86XK2 927 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 SAMD3Q8N6K7 520 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 RGS22Q8NE09 1264 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 SOCS4Q8WXH5 440 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 SRRDQ9UH36 339 aa21.08■□□□□ 0.97
IRF1-203ENST00000437654 ABCB11O95342 1321 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 FCER1AP12319 257 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 IFNAR1P17181 557 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 CTGFP29279 349 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 SLC35G1Q2M3R5 365 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 RAB11FIP4Q86YS3 637 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 TRERF1Q96PN7 1200 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 PIGSQ96S52 555 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 NUDT12Q9BQG2 462 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 ACAD9Q9H845 621 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 SH2B1Q9NRF2 756 aaPredicted RBP21.07■□□□□ 0.96
IRF1-203ENST00000437654 GJD2Q9UKL4 321 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 RIPK3Q9Y572 518 aa21.07■□□□□ 0.96
IRF1-203ENST00000437654 CPLX1O14810 134 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 CDKL5O76039 1030 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 SNAP25P60880 206 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 IRF5Q13568 498 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 KCTD2Q14681 263 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 NTRK3Q16288 839 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 MORN1Q5T089 497 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 OTOP1Q7RTM1 612 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 TEX2Q8IWB9 1127 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 ARHGAP39Q9C0H5 1083 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 SLC5A4Q9NY91 659 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 MAP3K20Q9NYL2 800 aaKnown RBP21.06■□□□□ 0.96
IRF1-203ENST00000437654 MRPL11Q9Y3B7 192 aaKnown RBP21.06■□□□□ 0.96
IRF1-203ENST00000437654 TRIM17Q9Y577 477 aa21.06■□□□□ 0.96
IRF1-203ENST00000437654 hCG_1984214I3L0E3 225 aa21.05■□□□□ 0.96
IRF1-203ENST00000437654 PRPF3O43395 683 aaKnown RBP21.05■□□□□ 0.96
IRF1-203ENST00000437654 XRCC5P13010 732 aaKnown RBP21.05■□□□□ 0.96
IRF1-203ENST00000437654 ALAS1P13196 640 aa21.05■□□□□ 0.96
IRF1-203ENST00000437654 CCT2P78371 535 aaKnown RBP21.05■□□□□ 0.96
IRF1-203ENST00000437654 GRB14Q14449 540 aa21.05■□□□□ 0.96
IRF1-203ENST00000437654 ME3Q16798 604 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms