RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 RRAGAQ7L523 313 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 TRIM50Q86XT4 487 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 PRPF31Q8WWY3 499 aaKnown RBP17.45■□□□□ 0.38
PTPN13-204ENST00000436978 JPH2Q9BR39 696 aaPredicted RBP17.45■□□□□ 0.38
PTPN13-204ENST00000436978 ATG3Q9NT62 314 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 CCDC160A6NGH7 325 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 MAGEA1P43355 309 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 SLC12A2P55011 1212 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 HADHQ16836 314 aaKnown RBP17.45■□□□□ 0.38
PTPN13-204ENST00000436978 HOXA7P31268 230 aaPredicted RBP17.45■□□□□ 0.38
PTPN13-204ENST00000436978 SCNN1DP51172 638 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 NCAPG2Q86XI2 1143 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 RAB20Q9NX57 234 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 FAM81BQ96LP2 452 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 HPDP32754 393 aaPredicted RBP17.45■□□□□ 0.38
PTPN13-204ENST00000436978 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 KIAA0825Q8IV33 1275 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 PFDN6O15212 129 aa17.45■□□□□ 0.38
PTPN13-204ENST00000436978 CEP104O60308 925 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 BBOX1O75936 387 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 CSRNP1Q96S65 589 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 RBSNQ9H1K0 784 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 GBP1P32455 592 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 ARHGAP24Q8N264 748 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 KIAA1468Q9P260 1216 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 TBC1D8O95759 1140 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
PTPN13-204ENST00000436978 ADD3Q9UEY8 706 aaKnown RBP17.44■□□□□ 0.38
PTPN13-204ENST00000436978 TRAPPC10P48553 1259 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 NT5C2P49902 561 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 CUL4BQ13620 913 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 CEP85LQ5SZL2 805 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 ZFP91Q96JP5 570 aaPredicted RBP17.44■□□□□ 0.38
PTPN13-204ENST00000436978 AK8Q96MA6 479 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 hCG_1642624A0A1W2PR95 340 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 PIK3CAP42336 1068 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 BIRC2Q13490 618 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 DOK7Q18PE1 504 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 FAM47CQ5HY64 1035 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 MYO1AQ9UBC5 1043 aa17.44■□□□□ 0.38
PTPN13-204ENST00000436978 GTPBP6O43824 516 aaPredicted RBP17.44■□□□□ 0.38
PTPN13-204ENST00000436978 ARHGAP31Q2M1Z3 1444 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 ERVV-1B6SEH8 477 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 CAPN9O14815 690 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 XPOTO43592 962 aaKnown RBP17.43■□□□□ 0.38
PTPN13-204ENST00000436978 RUNDC3BQ96NL0 473 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 NBPF3Q9H094 633 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 GREM2Q9H772 168 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 COPRSQ9NQ92 184 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 ARMCX3Q9UH62 379 aaPredicted RBP17.43■□□□□ 0.38
PTPN13-204ENST00000436978 CCND2P30279 289 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 MTX1Q13505 466 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 SLFN13Q68D06 897 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 PLA2G4DQ86XP0 818 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 MICALL1Q8N3F8 863 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 OATP04181 439 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 AOC3Q16853 763 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 RSPH3Q86UC2 560 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 WDR70Q9NW82 654 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 PFKFB1P16118 471 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 ARHGAP44Q17R89 818 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 MIS18BP1Q6P0N0 1132 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 AMNQ9BXJ7 453 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 FGAP02671 866 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 PPFIBP2Q8ND30 876 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 EIF3CLB5ME19 914 aaKnown RBP17.43■□□□□ 0.38
PTPN13-204ENST00000436978 RETREG2Q8NC44 543 aa17.43■□□□□ 0.38
PTPN13-204ENST00000436978 EIF3CQ99613 913 aaKnown RBP17.43■□□□□ 0.38
PTPN13-204ENST00000436978 RBM6P78332 1123 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 MUM1L1Q5H9M0 696 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 HHATQ5VTY9 493 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 FOXP1Q9H334 677 aaPredicted RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 RXRBP28702 533 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 SERTAD1Q9UHV2 236 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 PSDA5PKW4 1024 aaPredicted RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 RPN1P04843 607 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 FAM207AQ9NSI2 230 aaPredicted RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 MBD5Q9P267 1494 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 POLR2BP30876 1174 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 ATP6V0A1Q93050 837 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 NOC2LQ9Y3T9 749 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 BZW2Q9Y6E2 419 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 RNASE9P60153 205 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 EPSTI1Q96J88 318 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 IPO11Q9UI26 975 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 POLA2Q14181 598 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 RINT1Q6NUQ1 792 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 PPP1R2P3Q6NXS1 205 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 MMS19Q96T76 1030 aa17.42■□□□□ 0.38
PTPN13-204ENST00000436978 LARSQ9P2J5 1176 aaKnown RBP17.42■□□□□ 0.38
PTPN13-204ENST00000436978 GAP43P17677 238 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 GKAP1Q5VSY0 366 aaPredicted RBP17.41■□□□□ 0.38
PTPN13-204ENST00000436978 CDHR1Q96JP9 859 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 KRT12Q99456 494 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms