RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CDC27P30260 824 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 CTHP32929 405 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 DDIT3P35638 169 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 CAP2P40123 477 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 TROAPQ12815 778 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 SUPT20HL1Q3ZLR7 823 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 TMEM179Q6ZVK1 233 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 SND1Q7KZF4 910 aaKnown RBP eCLIP8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 KRT26Q7Z3Y9 468 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 INTS4Q96HW7 963 aaKnown RBP8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 HS3ST6Q96QI5 342 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 GLIS2Q9BZE0 524 aaPredicted RBP8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 KANSL2Q9H9L4 492 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 NMRK2Q9NPI5 230 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 EVA1BQ9NVM1 165 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 CLIP2Q9UDT6 1046 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 ZNF112Q9UJU3 913 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 NAP1L2Q9ULW6 460 aaPredicted RBP8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 STX8Q9UNK0 236 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 FZD1Q9UP38 647 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 SSC5DA1L4H1 1573 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 WDR90Q96KV7 1748 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 FOCADQ5VW36 1801 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 CTNND1O60716 968 aaKnown RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 USP2O75604 605 aaPredicted RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 DXOO77932 396 aaKnown RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 DDAH1O94760 285 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 TTLL1O95922 423 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 TOP1P11387 765 aaKnown RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 EEF2P13639 858 aaKnown RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 ADD1P35611 737 aaKnown RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 METAP2P50579 478 aaKnown RBP eCLIP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 RCAN1P53805 252 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 DCAF15Q66K64 600 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 MAP1SQ66K74 1059 aaPredicted RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 SYNE3Q6ZMZ3 975 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 CATIPQ7Z7H3 387 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 MICU3Q86XE3 530 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 FANCBQ8NB91 859 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 ZNF526Q8TF50 670 aaPredicted RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 MKL1Q969V6 931 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 HOOK2Q96ED9 719 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 CDCA5Q96FF9 252 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 LLPHQ9BRT6 129 aaKnown RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 ZNF341Q9BYN7 854 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 KAT14Q9H8E8 782 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 CABP5Q9NP86 173 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 NYAP2Q9P242 653 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 ZBTB21Q9ULJ3 1066 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 GOLGB1Q14789 3259 aaKnown RBP8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 NID2Q14112 1375 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 LAMB1P07942 1786 aa8.2□□□□□ -1.1
LSM3P3-201ENST00000436601 SIPA1L1O43166 1804 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 CDK5RAP2Q96SN8 1893 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 BAZ2AQ9UIF9 1905 aaKnown RBP8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 A0A1W2PRG0 241 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 GOLGA8AA7E2F4 631 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 JAK2O60674 1132 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 HSP90AA1P07900 732 aaKnown RBP8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 CALM1P0DP23 149 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 CALM2P0DP24 149 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 CALM3P0DP25 149 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 INPP5BP32019 993 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 ICA1Q05084 483 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 KCNH2Q12809 1159 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 RAB3GAP1Q15042 981 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 NTRK3Q16288 839 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 NSUN7Q8NE18 718 aaKnown RBP8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 SMARCC2Q8TAQ2 1214 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 NUP133Q8WUM0 1156 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 KLRG1Q96E93 195 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 MAP3K14Q99558 947 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 NUDT12Q9BQG2 462 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 ZMIZ1Q9ULJ6 1067 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 NOVA2Q9UNW9 492 aaKnown RBP8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 ECM29Q5VYK3 1845 aa8.19□□□□□ -1.1
LSM3P3-201ENST00000436601 PTPDC1A2A3K4 754 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 TRAF5O00463 557 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 DHX16O60231 1041 aaKnown RBP8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 PPFIA3O75145 1194 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 ASNSP08243 561 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 FDPSP14324 419 aaKnown RBP8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 ECE1P42892 770 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 MMP16P51512 607 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 FMR1Q06787 632 aaKnown RBP eCLIP8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 PRKG1Q13976 671 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 GRM4Q14833 912 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 RTN1Q16799 776 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 TMEM164Q5U3C3 297 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 RASGRP2Q7LDG7 609 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 CCDC84Q86UT8 332 aaPredicted RBP8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 LDHDQ86WU2 507 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 SCYL3Q8IZE3 742 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms