RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 hCG_1984214I3L0E3 225 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 VWA5AO00534 786 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 ZSCAN22P10073 491 aaPredicted RBP11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 OSBPP22059 807 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 INHBEP58166 350 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 NLRP5P59047 1200 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 ANKRD23Q86SG2 305 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 ZNF713Q8N859 430 aaPredicted RBP11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 BRI3BPQ8WY22 251 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 COA7Q96BR5 231 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 SHISA4Q96DD7 197 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 ATG4CQ96DT6 458 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 AMNQ9BXJ7 453 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 ASCC2Q9H1I8 757 aaPredicted RBP11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 PCDHA1Q9Y5I3 950 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 PAPPA2Q9BXP8 1791 aa11.39□□□□□ -0.59
AC004448.3-201ENST00000435953 SMCO2A6NFE2 343 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 MANSC4A6NHS7 340 aaPredicted RBP11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 FAM155AB1AL88 458 aaPredicted RBP11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 BTBD19C9JJ37 291 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 SLC10A3P09131 477 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 NAPAP54920 295 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 SAFBQ15424 915 aaKnown RBP eCLIP11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 DEFB115Q30KQ5 88 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 FOXD4L5Q5VV16 416 aaPredicted RBP11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 GALNT17Q6IS24 598 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 TYW1BQ6NUM6 668 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 CCDC174Q6PII3 467 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 CCDC12Q8WUD4 166 aaPredicted RBP11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 FOXD4L4Q8WXT5 416 aaPredicted RBP11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 PTPN18Q99952 460 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 PHF20Q9BVI0 1012 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 PNMA2Q9UL42 364 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 SLC45A1Q9Y2W3 748 aa11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 CTDP1Q9Y5B0 961 aaPredicted RBP11.38□□□□□ -0.59
AC004448.3-201ENST00000435953 ZNF536O15090 1300 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 SPDYE16A6NNV3 312 aaPredicted RBP11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 PDHXO00330 501 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 MMP1P03956 469 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 ICAM1P05362 532 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 CALML3P27482 149 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 MCTP1Q6DN14 999 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 POTEEQ6S8J3 1075 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 LBX2Q6XYB7 198 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 REPS2Q8NFH8 660 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 AGBL1Q96MI9 1066 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 ZMYND12Q9H0C1 365 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 RAVER2Q9HCJ3 691 aaKnown RBP11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 C6orf50Q9HD87 102 aa11.37□□□□□ -0.59
AC004448.3-201ENST00000435953 ESYT2A0FGR8 921 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 RASSF10A6NK89 507 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 ATP2A1O14983 1001 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 F13A1P00488 732 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 GNA11P29992 359 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 TM4SF4P48230 202 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 MRPL12P52815 198 aaKnown RBP11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 OAZ1P54368 228 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 HERVK_113P62684 666 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 NPY5RQ15761 445 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 USH1GQ495M9 461 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 CYP4F22Q6NT55 531 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 PPP1R18Q6NYC8 613 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 FERMT3Q86UX7 667 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 DIS3L2Q8IYB7 885 aaKnown RBP11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 BLIDQ8IZY5 108 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 CPXCR1Q8N123 301 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 FAM43AQ8N2R8 423 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 CCDC148Q8NFR7 591 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 OXER1Q8TDS5 423 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 GLT8D2Q9H1C3 349 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 FOXP1Q9H334 677 aaPredicted RBP11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 ZSCAN16Q9H4T2 348 aaPredicted RBP11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 PSTPIP2Q9H939 334 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 RIC8AQ9NPQ8 531 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 PCDHA4Q9UN74 947 aa11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 MRPL11Q9Y3B7 192 aaKnown RBP11.36□□□□□ -0.59
AC004448.3-201ENST00000435953 ADAMTS3O15072 1205 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 KRT2P35908 639 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 STAT3P40763 770 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 KIF23Q02241 960 aaPredicted RBP11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 RESTQ13127 1097 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 BICD2Q8TD16 824 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 BRMS1Q9HCU9 246 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 ZCCHC17Q9NP64 241 aaKnown RBP11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 BTBD7Q9P203 1132 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 RBPJLQ9UBG7 517 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 ZNF214Q9UL59 606 aaPredicted RBP11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 CCPG1Q9ULG6 757 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 RABGAP1Q9Y3P9 1069 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms