RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 CEP85Q6P2H3 762 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 SPRED2Q7Z698 418 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 DEFB128Q7Z7B8 93 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 HERC6Q8IVU3 1022 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 ITPRIPQ8IWB1 547 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
CPNE1-214ENST00000435747 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 VWCEQ96DN2 955 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 UPF3AQ9H1J1 476 aaKnown RBP12.64□□□□□ -0.39
CPNE1-214ENST00000435747 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 FAM50BQ9Y247 325 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 FPGT-TNNI3KV9GXZ4 949 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 WDR87Q6ZQQ6 2873 aa12.64□□□□□ -0.39
CPNE1-214ENST00000435747 NCOR2Q9Y618 2525 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 DMDP11532 3685 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 PARP14Q460N5 1801 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 PKN1Q16512 942 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 NAA16Q6N069 864 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-214ENST00000435747 SLC43A3Q8NBI5 491 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 TET1Q8NFU7 2136 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 ZNF512BQ96KM6 892 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-214ENST00000435747 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 NEUROD6Q96NK8 337 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 DBNDD2Q9BQY9 259 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 TRPV6Q9H1D0 765 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 PRKAG3Q9UGI9 489 aa12.63□□□□□ -0.39
CPNE1-214ENST00000435747 MYO7AQ13402 2215 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 B4GALT4O60513 344 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 CABYRO75952 493 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 SNAI1O95863 264 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-214ENST00000435747 PPP4CP60510 307 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 ITGA7Q13683 1181 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 ACVR2BQ13705 512 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 TMEM132BQ14DG7 1078 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
CPNE1-214ENST00000435747 SEZ6LQ9BYH1 1024 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 DBNLQ9UJU6 430 aaKnown RBP12.62□□□□□ -0.39
CPNE1-214ENST00000435747 ACACBO00763 2458 aa12.62□□□□□ -0.39
CPNE1-214ENST00000435747 KMT2BQ9UMN6 2715 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-214ENST00000435747 SIP14410 1827 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 H3BQ06 376 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-214ENST00000435747 ADCY6O43306 1168 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
CPNE1-214ENST00000435747 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 BEX3Q00994 111 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 SEPT2Q15019 361 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 CCDC144BQ3MJ40 725 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 CXCL17Q6UXB2 119 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 BMP8AQ7Z5Y6 402 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 RIOX2Q8IUF8 465 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 ADHFE1Q8IWW8 467 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 NEK9Q8TD19 979 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 ATOH1Q92858 354 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-214ENST00000435747 PBXIP1Q96AQ6 731 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 EAF2Q96CJ1 260 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-214ENST00000435747 IRF2BPLQ9H1B7 796 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 EHD4Q9H223 541 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 TLR7Q9NYK1 1049 aaKnown RBP12.61□□□□□ -0.39
CPNE1-214ENST00000435747 MUTYHQ9UIF7 546 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 KMT2EQ8IZD2 1858 aa12.61□□□□□ -0.39
CPNE1-214ENST00000435747 PTPRSQ13332 1948 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 PKD1L2Q7Z442 2459 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 PLXNA3P51805 1871 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 A0A1W2PRG0 241 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 KRT37O76014 449 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 CYP2E1P05181 493 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-214ENST00000435747 UQCRFS1P1P0C7P4 283 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 IRS1P35568 1242 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 COPB2P35606 906 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 ID4P47928 161 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 HERC4Q5GLZ8 1057 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-214ENST00000435747 GORABQ5T7V8 394 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 MAMDC4Q6UXC1 1216 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 SIRT2Q8IXJ6 389 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 SUGCTQ9HAC7 445 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 MTUS1Q9ULD2 1270 aa12.6□□□□□ -0.39
CPNE1-214ENST00000435747 VPS13AQ96RL7 3174 aa12.59□□□□□ -0.39
CPNE1-214ENST00000435747 LCHNA4D1U4 455 aa12.59□□□□□ -0.39
CPNE1-214ENST00000435747 CTAGE5O15320 804 aa12.59□□□□□ -0.39
CPNE1-214ENST00000435747 STAT3P40763 770 aa12.59□□□□□ -0.39
CPNE1-214ENST00000435747 ADGRA1Q86SQ6 560 aa12.59□□□□□ -0.39
CPNE1-214ENST00000435747 DDX11Q96FC9 970 aa12.59□□□□□ -0.39
CPNE1-214ENST00000435747 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.391e-9■□□□□ 9.8
CPNE1-214ENST00000435747 ABHD16BQ9H3Z7 469 aa12.59□□□□□ -0.39
CPNE1-214ENST00000435747 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-214ENST00000435747 TMEM221A6NGB7 291 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 M0R296 226 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 MPHOSPH10O00566 681 aaKnown RBP12.58□□□□□ -0.4
CPNE1-214ENST00000435747 IGSF3O75054 1194 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 RFC2P35250 354 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 USP5P45974 858 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 KCNJ6P48051 423 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 NKX3-2P78367 333 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 EP400NLQ6ZTU2 488 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms