RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 YEATS4O95619 227 aa17.32■□□□□ 0.36
TMEM40-204ENST00000435218 NASPP49321 788 aaPredicted RBP17.32■□□□□ 0.36
TMEM40-204ENST00000435218 IKQ13123 557 aaPredicted RBP17.32■□□□□ 0.36
TMEM40-204ENST00000435218 ERO1BQ86YB8 467 aa17.32■□□□□ 0.36
TMEM40-204ENST00000435218 PRPF38AQ8NAV1 312 aaKnown RBP17.32■□□□□ 0.36
TMEM40-204ENST00000435218 BICD2Q8TD16 824 aa17.32■□□□□ 0.36
TMEM40-204ENST00000435218 AMNQ9BXJ7 453 aa17.32■□□□□ 0.36
TMEM40-204ENST00000435218 GLT8D2Q9H1C3 349 aa17.32■□□□□ 0.36
TMEM40-204ENST00000435218 RCOR1Q9UKL0 485 aa17.32■□□□□ 0.36
TMEM40-204ENST00000435218 SMCO2A6NFE2 343 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
TMEM40-204ENST00000435218 FDX1P10109 184 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 SKOR2Q2VWA4 1001 aaPredicted RBP17.31■□□□□ 0.36
TMEM40-204ENST00000435218 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
TMEM40-204ENST00000435218 COA7Q96BR5 231 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 SPATA32Q96LK8 384 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 GDPD2Q9HCC8 539 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 TFIP11Q9UBB9 837 aaKnown RBP17.31■□□□□ 0.36
TMEM40-204ENST00000435218 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 TRAPPC10P48553 1259 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 FBXO11Q86XK2 927 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 SLF1Q9BQI6 1058 aa17.31■□□□□ 0.36
TMEM40-204ENST00000435218 MORC2Q9Y6X9 1032 aaPredicted RBP17.31■□□□□ 0.36
TMEM40-204ENST00000435218 TOB1P50616 345 aaPredicted RBP17.3■□□□□ 0.36
TMEM40-204ENST00000435218 HMGCS2P54868 508 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 PPIL2Q13356 520 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
TMEM40-204ENST00000435218 NBR1Q14596 966 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 ANO1Q5XXA6 986 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 RPAP3Q9H6T3 665 aaPredicted RBP17.3■□□□□ 0.36
TMEM40-204ENST00000435218 RIC8AQ9NPQ8 531 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 TMOD4Q9NZQ9 345 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 PCDHA6Q9UN73 950 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 KCNH4Q9UQ05 1017 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 PCDHA8Q9Y5H6 950 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 PCDHA1Q9Y5I3 950 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 MYPNQ86TC9 1320 aa17.3■□□□□ 0.36
TMEM40-204ENST00000435218 TRAF5O00463 557 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 CXCL11O14625 94 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 ADCY7P51828 1080 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 UBE2HP62256 183 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 MOB2Q70IA6 237 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 ELP3Q9H9T3 547 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 FBXO28Q9NVF7 368 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 PNMA2Q9UL42 364 aa17.29■□□□□ 0.36
TMEM40-204ENST00000435218 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
TMEM40-204ENST00000435218 A0A0G2JLL6 359 aaPredicted RBP17.28■□□□□ 0.36
TMEM40-204ENST00000435218 MBD3O95983 291 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 CLK2P49760 499 aaKnown RBP17.28■□□□□ 0.36
TMEM40-204ENST00000435218 MRPL12P52815 198 aaKnown RBP17.28■□□□□ 0.36
TMEM40-204ENST00000435218 DGKZQ13574 1117 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 KLHL40Q2TBA0 621 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 EARS2Q5JPH6 523 aaKnown RBP17.28■□□□□ 0.36
TMEM40-204ENST00000435218 CHADLQ6NUI6 762 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 KRT25Q7Z3Z0 450 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 PRRT2Q7Z6L0 340 aaPredicted RBP17.28■□□□□ 0.36
TMEM40-204ENST00000435218 REXO1Q8N1G1 1221 aaKnown RBP17.28■□□□□ 0.36
TMEM40-204ENST00000435218 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
TMEM40-204ENST00000435218 KCNG4Q8TDN1 519 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 CUL5Q93034 780 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 KIFC2Q96AC6 838 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 TANGO6Q9C0B7 1094 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 CLIC4Q9Y696 253 aa17.28■□□□□ 0.36
TMEM40-204ENST00000435218 CCDC194A0A1B0GVG4 234 aa17.27■□□□□ 0.36
TMEM40-204ENST00000435218 ADAMTS3O15072 1205 aa17.27■□□□□ 0.36
TMEM40-204ENST00000435218 TRAK2O60296 914 aa17.27■□□□□ 0.36
TMEM40-204ENST00000435218 ITGBL1O95965 494 aaPredicted RBP17.27■□□□□ 0.36
TMEM40-204ENST00000435218 SLC39A14Q15043 492 aa17.27■□□□□ 0.36
TMEM40-204ENST00000435218 PTPAQ15257 358 aa17.27■□□□□ 0.36
TMEM40-204ENST00000435218 SF3A1Q15459 793 aaKnown RBP17.27■□□□□ 0.36
TMEM40-204ENST00000435218 MCTP2Q6DN12 878 aa17.27■□□□□ 0.36
TMEM40-204ENST00000435218 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.36
TMEM40-204ENST00000435218 SLC38A10Q9HBR0 1119 aa17.27■□□□□ 0.36
TMEM40-204ENST00000435218 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.27■□□□□ 0.36
TMEM40-204ENST00000435218 ADAMTS5Q9UNA0 930 aa17.27■□□□□ 0.36
TMEM40-204ENST00000435218 ABCB11O95342 1321 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 FAM205CA6NFA0 338 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 IRF6O14896 467 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 PPP6R2O75170 966 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 FLOT1O75955 427 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 ICAM1P05362 532 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 CATSPERGQ6ZRH7 1159 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 PIK3AP1Q6ZUJ8 805 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 PSTPIP2Q9H939 334 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 GBA2Q9HCG7 927 aaPredicted RBP17.26■□□□□ 0.35
TMEM40-204ENST00000435218 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 ZNF536O15090 1300 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
TMEM40-204ENST00000435218 SPTLC2O15270 562 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms