RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 SCNN1DP51172 638 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 FKBP1AP62942 108 aaKnown RBP18.9■□□□□ 0.62
LIMK1-203ENST00000435201 RRAGBQ5VZM2 374 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 REXO1Q8N1G1 1221 aaKnown RBP18.9■□□□□ 0.62
LIMK1-203ENST00000435201 RASSF8Q8NHQ8 419 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 EHD4Q9H223 541 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 CUEDC2Q9H467 287 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 MAGEF1Q9HAY2 307 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 VAT1LQ9HCJ6 419 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 APOBEC3HQ6NTF7 200 aaKnown RBP18.89■□□□□ 0.61
LIMK1-203ENST00000435201 PPP1R18Q6NYC8 613 aa18.89■□□□□ 0.61
LIMK1-203ENST00000435201 SMYD4Q8IYR2 804 aaPredicted RBP18.89■□□□□ 0.61
LIMK1-203ENST00000435201 LRRC47Q8N1G4 583 aaKnown RBP18.89■□□□□ 0.61
LIMK1-203ENST00000435201 KIF18AQ8NI77 898 aa18.89■□□□□ 0.61
LIMK1-203ENST00000435201 ZNF592Q92610 1267 aa18.89■□□□□ 0.61
LIMK1-203ENST00000435201 MXD3Q9BW11 206 aa18.89■□□□□ 0.61
LIMK1-203ENST00000435201 MRIQ9BWK5 157 aa18.89■□□□□ 0.61
LIMK1-203ENST00000435201 RWDD2AQ9UIY3 292 aa18.89■□□□□ 0.61
LIMK1-203ENST00000435201 CTNND2Q9UQB3 1225 aa18.89■□□□□ 0.61
LIMK1-203ENST00000435201 FRMPD2Q68DX3 1309 aaPredicted RBP18.88■□□□□ 0.61
LIMK1-203ENST00000435201 ARHGAP6O43182 974 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 SHMT1P34896 483 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 CRKP46108 304 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 STX17P56962 302 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 SYCP1Q15431 976 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 FILIP1LQ4L180 1135 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 STYK1Q6J9G0 422 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 APTXQ7Z2E3 356 aaKnown RBP18.88■□□□□ 0.61
LIMK1-203ENST00000435201 ZNF622Q969S3 477 aaKnown RBP eCLIP18.88■□□□□ 0.61
LIMK1-203ENST00000435201 UBA5Q9GZZ9 404 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 CCNT1O60563 726 aaKnown RBP18.88■□□□□ 0.61
LIMK1-203ENST00000435201 PAK1Q13153 545 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 LETM2Q2VYF4 491 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 NAALADL2Q58DX5 795 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 C2CD5Q86YS7 1000 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 ZDHHC15Q96MV8 337 aa18.88■□□□□ 0.61
LIMK1-203ENST00000435201 MYH4Q9Y623 1939 aa18.87■□□□□ 0.61
LIMK1-203ENST00000435201 CDC25AP30304 524 aa18.87■□□□□ 0.61
LIMK1-203ENST00000435201 SPAG1Q07617 926 aa18.87■□□□□ 0.61
LIMK1-203ENST00000435201 KCNB1Q14721 858 aa18.87■□□□□ 0.61
LIMK1-203ENST00000435201 CCDC17Q96LX7 622 aa18.87■□□□□ 0.61
LIMK1-203ENST00000435201 ADCY7P51828 1080 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 HDLBPQ00341 1268 aaKnown RBP18.86■□□□□ 0.61
LIMK1-203ENST00000435201 ZNF543Q08ER8 600 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 GPATCH4Q5T3I0 446 aaKnown RBP18.86■□□□□ 0.61
LIMK1-203ENST00000435201 STRIP1Q5VSL9 837 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 TMEM139Q8IV31 216 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 TBCKQ8TEA7 893 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 KBTBD4Q9NVX7 518 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 ADD3Q9UEY8 706 aaKnown RBP18.86■□□□□ 0.61
LIMK1-203ENST00000435201 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
LIMK1-203ENST00000435201 PP2D1A8MPX8 630 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 H0YIN7 160 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 ZSCAN12O43309 604 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 STX10O60499 249 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 CABP7Q86V35 215 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 TC2NQ8N9U0 490 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 BAG1Q99933 345 aaPredicted RBP18.86■□□□□ 0.61
LIMK1-203ENST00000435201 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
LIMK1-203ENST00000435201 DBNDD1Q9H9R9 158 aa18.86■□□□□ 0.61
LIMK1-203ENST00000435201 ZNF646O15015 1829 aaPredicted RBP18.86■□□□□ 0.61
LIMK1-203ENST00000435201 PNMA6FA0A0J9YX94 578 aa18.85■□□□□ 0.61
LIMK1-203ENST00000435201 EIF6P56537 245 aaKnown RBP18.85■□□□□ 0.61
LIMK1-203ENST00000435201 PTPN21Q16825 1174 aa18.85■□□□□ 0.61
LIMK1-203ENST00000435201 ANKRD20A12PQ8NF67 263 aa18.85■□□□□ 0.61
LIMK1-203ENST00000435201 NELFBQ8WX92 580 aa18.85■□□□□ 0.61
LIMK1-203ENST00000435201 TSC1Q92574 1164 aa18.85■□□□□ 0.61
LIMK1-203ENST00000435201 BIN2Q9UBW5 565 aaPredicted RBP18.85■□□□□ 0.61
LIMK1-203ENST00000435201 LIMA1Q9UHB6 759 aaKnown RBP18.85■□□□□ 0.61
LIMK1-203ENST00000435201 NFIAQ12857 509 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 JAKMIP3Q5VZ66 844 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 MSL1Q68DK7 614 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 ZNF710Q8N1W2 664 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 GPCPD1Q9NPB8 672 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 SIPA1L1O43166 1804 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 GOLGA6L9A6NEM1 432 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 MPHOSPH10O00566 681 aaKnown RBP18.84■□□□□ 0.61
LIMK1-203ENST00000435201 PBX1P40424 430 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 GOLGA8FQ08AF8 430 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 GOLGA8DPQ0D2H9 430 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 STIM1Q13586 685 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 CLEC10AQ8IUN9 316 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 GTPBP4Q9BZE4 634 aaKnown RBP18.84■□□□□ 0.61
LIMK1-203ENST00000435201 JMJD4Q9H9V9 463 aa18.84■□□□□ 0.61
LIMK1-203ENST00000435201 ITIH6Q6UXX5 1313 aa18.83■□□□□ 0.61
LIMK1-203ENST00000435201 AKR1B15C9JRZ8 316 aaPredicted RBP18.83■□□□□ 0.6
LIMK1-203ENST00000435201 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
LIMK1-203ENST00000435201 DACT2Q5SW24 774 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 PPFIBP1Q86W92 1011 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 ADGRF4Q8IZF3 695 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 ADSSL1Q8N142 457 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 CCDC47Q96A33 483 aaKnown RBP18.83■□□□□ 0.6
LIMK1-203ENST00000435201 COA7Q96BR5 231 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 PANX2Q96RD6 677 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 IDI2Q9BXS1 227 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 RIC8AQ9NPQ8 531 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 SLX4Q8IY92 1834 aa18.83■□□□□ 0.6
LIMK1-203ENST00000435201 SCN9AQ15858 1988 aa18.82■□□□□ 0.6
LIMK1-203ENST00000435201 LRRC10BA6NIK2 292 aa18.82■□□□□ 0.6
LIMK1-203ENST00000435201 TEX33O43247 280 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms