RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 UPF3AQ9H1J1 476 aaKnown RBP13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 PRDM12Q9H4Q4 367 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 FBXO40Q9UH90 709 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 FEM1BQ9UK73 627 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 MYH4Q9Y623 1939 aa13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 PRDM1O75626 825 aa13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 NOL8Q76FK4 1167 aaKnown RBP13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 CHST13Q8NET6 341 aa13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 FGD4Q96M96 766 aa13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 SLC38A10Q9HBR0 1119 aa13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 HOMER2Q9NSB8 354 aa13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 ISY1Q9ULR0 285 aaKnown RBP13.85□□□□□ -0.19
CHRNA1-207ENST00000435083 CYP2C18P33260 490 aa13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 TDO2P48775 406 aa13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 BEX3Q00994 111 aa13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 PSRC1Q6PGN9 363 aaPredicted RBP13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 FAM126BQ8IXS8 530 aa13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 LRRC47Q8N1G4 583 aaKnown RBP13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 OSBP2Q969R2 916 aa13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
CHRNA1-207ENST00000435083 IGKV6D-41A0A0C4DH26 115 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 TNFRSF10AO00220 468 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 APPP05067 770 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 CNTN2Q02246 1040 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 TNFAIP2Q03169 654 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 RASIP1Q5U651 963 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 APPBP2Q92624 585 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 MKL1Q969V6 931 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 CEP95Q96GE4 821 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 ZNF287Q9HBT7 754 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 ECHDC1Q9NTX5 307 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 MTMR4Q9NYA4 1195 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 MSRAQ9UJ68 235 aa13.83□□□□□ -0.19
CHRNA1-207ENST00000435083 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 CTAGE5O15320 804 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 BMP3P12645 472 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 IGFBP4P22692 258 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 OAZ1P54368 228 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 SLFN13Q68D06 897 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 CXCL17Q6UXB2 119 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 KBTBD3Q8NAB2 608 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 EPB41L4AQ9HCS5 686 aaPredicted RBP13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 IL23AQ9NPF7 189 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 EYSQ5T1H1 3165 aa13.83□□□□□ -0.2
CHRNA1-207ENST00000435083 TMEM232C9JQI7 657 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 RNF113AO15541 343 aaKnown RBP13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 GPAA1O43292 621 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 TTLL1O95922 423 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 CD4P01730 458 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 FGBP02675 491 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 IKQ13123 557 aaPredicted RBP13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 RAB30Q15771 203 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 GMCL1P1Q8NEA9 526 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 KATNBL1Q9H079 304 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 MTIF3Q9H2K0 278 aaKnown RBP13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 NKX2-4Q9H2Z4 354 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 ACAD9Q9H845 621 aa13.82□□□□□ -0.2
CHRNA1-207ENST00000435083 TSPY3P0CV98 308 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 TSPY8P0CW00 308 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 FDX1P10109 184 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 GNAT2P19087 354 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 AKNAD1Q5T1N1 836 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 MIER1Q8N108 512 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 FAM133AQ8N9E0 248 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 HERVK_113Q902F9 699 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 AGBL1Q96MI9 1066 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 AP5M1Q9H0R1 490 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 HIPK3Q9H422 1215 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 RNF146Q9NTX7 359 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 CXXC1Q9P0U4 656 aaPredicted RBP13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 THEGQ9P2T0 379 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 SYNPO2Q9UMS6 1093 aa13.81□□□□□ -0.2
CHRNA1-207ENST00000435083 ASTN1O14525 1302 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 UMODL1Q5DID0 1318 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 SOWAHBA6NEL2 793 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 ASB14A6NK59 587 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 M0R2C6 588 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 DYNC1LI2O43237 492 aaPredicted RBP13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 CABYRO75952 493 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 COL9A1P20849 921 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 CCL23P55773 120 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 NKX3-2P78367 333 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 ITGA7Q13683 1181 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 TSHZ3Q63HK5 1081 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 TLK2Q86UE8 772 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 IFNL3Q8IZI9 196 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 CHURC1Q8WUH1 139 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 GPATCH3Q96I76 525 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 ASB2Q96Q27 587 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 SLC28A3Q9HAS3 691 aa13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 A1CFQ9NQ94 594 aaKnown RBP13.8□□□□□ -0.2
CHRNA1-207ENST00000435083 PATL2C9JE40 543 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms