RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 ZFPM1Q8IX07 1006 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
CLDN4-203ENST00000435050 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
CLDN4-203ENST00000435050 SPEF2Q9C093 1822 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 CCP110O43303 1012 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 GH2P01242 217 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 RHBDL3P58872 404 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 GJA10Q969M2 543 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 TUBE1Q9UJT0 475 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 A0A087X0B3 334 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 ADAMTS3O15072 1205 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
CLDN4-203ENST00000435050 EEF2P13639 858 aaKnown RBP13.68□□□□□ -0.22
CLDN4-203ENST00000435050 ASPRV1Q53RT3 343 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 IMPACTQ9P2X3 320 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 PI4KBQ9UBF8 816 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 MYH3P11055 1940 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 PDS5AQ29RF7 1337 aaKnown RBP13.68□□□□□ -0.22
CLDN4-203ENST00000435050 STXBP3O00186 592 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 CFBP00751 764 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 PDHBP11177 359 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 PLCG1P19174 1290 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 HOXA10P31260 410 aaPredicted RBP13.68□□□□□ -0.22
CLDN4-203ENST00000435050 FUT2Q10981 343 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 SV2BQ7L1I2 683 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 KIFC2Q96AC6 838 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 DYNC1I1O14576 645 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
CLDN4-203ENST00000435050 ZBTB7AO95365 584 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 TDP2O95551 362 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 CDC25BP30305 580 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 NAP1L1P55209 391 aaKnown RBP13.68□□□□□ -0.22
CLDN4-203ENST00000435050 SPECC1LQ69YQ0 1117 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 GSDMAQ96QA5 445 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 SRRTQ9BXP5 876 aaKnown RBP13.68□□□□□ -0.22
CLDN4-203ENST00000435050 SLC39A2Q9NP94 309 aa13.68□□□□□ -0.22
CLDN4-203ENST00000435050 POTEMA6NI47 508 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 CHMP2AO43633 222 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 BAG6P46379 1132 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 TRIML1Q8N9V2 468 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 SWAP70Q9UH65 585 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 TRIM21P19474 475 aaKnown RBP13.67□□□□□ -0.22
CLDN4-203ENST00000435050 UBXN2AP68543 259 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 SPATA1Q5VX52 437 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 ADGRF4Q8IZF3 695 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 CSGALNACT2Q8N6G5 542 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 ZNHIT6Q9NWK9 470 aaKnown RBP13.67□□□□□ -0.22
CLDN4-203ENST00000435050 MORC3Q14149 939 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 CTAGE1Q96RT6 745 aa13.67□□□□□ -0.22
CLDN4-203ENST00000435050 TRIM49BA6NDI0 452 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 AKR1B15C9JRZ8 316 aaPredicted RBP13.66□□□□□ -0.22
CLDN4-203ENST00000435050 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 CPXCR1Q8N123 301 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 PDCL2Q8N4E4 241 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 MYRIPQ8NFW9 859 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 ZBTB9Q96C00 473 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 DISC1Q9NRI5 854 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 MYO5AQ9Y4I1 1855 aaKnown RBP13.66□□□□□ -0.22
CLDN4-203ENST00000435050 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
CLDN4-203ENST00000435050 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
CLDN4-203ENST00000435050 PRR16Q569H4 304 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 CCDC17Q96LX7 622 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 AKAP11Q9UKA4 1901 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 BAZ2AQ9UIF9 1905 aaKnown RBP13.66□□□□□ -0.22
CLDN4-203ENST00000435050 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 TTLL6Q8N841 843 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 ENOX1Q8TC92 643 aaKnown RBP13.66□□□□□ -0.22
CLDN4-203ENST00000435050 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
CLDN4-203ENST00000435050 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
CLDN4-203ENST00000435050 TEX33O43247 280 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 HOXA13P31271 388 aaPredicted RBP13.65□□□□□ -0.22
CLDN4-203ENST00000435050 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
CLDN4-203ENST00000435050 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 DEF6Q9H4E7 631 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 KANSL2Q9H9L4 492 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 SH3GLB2Q9NR46 395 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 DDTLA6NHG4 134 aaPredicted RBP13.65□□□□□ -0.22
CLDN4-203ENST00000435050 SPAG1Q07617 926 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 CCDC40Q4G0X9 1142 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 GPATCH4Q5T3I0 446 aaKnown RBP13.65□□□□□ -0.22
CLDN4-203ENST00000435050 TMED8Q6PL24 325 aaPredicted RBP13.65□□□□□ -0.22
CLDN4-203ENST00000435050 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 HPS3Q969F9 1004 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 SHISA4Q96DD7 197 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms