RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CUEDC1Q9NWM3 386 aaPredicted RBP8.56□□□□□ -1.04
COL17A1-204ENST00000433822 STK32BQ9NY57 414 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 ZSWIM5Q9P217 1185 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 LAMB1P07942 1786 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 MYH13Q9UKX3 1938 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 SMTNL1A8MU46 457 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 BECN2A8MW95 431 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 MSTNO14793 375 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 IFIT3O14879 490 aaKnown RBP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 RPS6KA4O75676 772 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 ZNF202O95125 648 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 DEXIO95424 95 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 TUBB4AP04350 444 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 CDC27P30260 824 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 NLRP12P59046 1061 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 HTRA3P83110 453 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 SAFBQ15424 915 aaKnown RBP eCLIP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 SYCP1Q15431 976 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 RTN1Q16799 776 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 TXNRD1Q16881 649 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 CAVIN4Q5BKX8 364 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 RILPL1Q5EBL4 403 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 FOXR1Q6PIV2 292 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 FBXO33Q7Z6M2 555 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 TNS4Q8IZW8 715 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 ESR2Q92731 530 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 SDF4Q9BRK5 362 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 RIOK1Q9BRS2 568 aaKnown RBP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 ANKRD2Q9GZV1 360 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 OSBPL5Q9H0X9 879 aaPredicted RBP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 PDCL3Q9H2J4 239 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 KCNF1Q9H3M0 494 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 RBM28Q9NW13 759 aaKnown RBP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 HOOK1Q9UJC3 728 aaKnown RBP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 NAP1L2Q9ULW6 460 aaPredicted RBP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 CEP131Q9UPN4 1083 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 R3HCC1Q9Y3T6 440 aaKnown RBP8.55□□□□□ -1.04
COL17A1-204ENST00000433822 CLIC4Q9Y696 253 aa8.55□□□□□ -1.04
COL17A1-204ENST00000433822 LY75O60449 1722 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 CCDC88AQ3V6T2 1871 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 UQCRHLA0A096LP55 91 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 KIF28PB7ZC32 967 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 ERVH48-1M5A8F1 160 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 KIF2AO00139 706 aaPredicted RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 ORC4O43929 436 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 RANBP6O60518 1105 aaKnown RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 LILRA1O75019 489 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 DDAH1O94760 285 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 MMP1P03956 469 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 UQCRHP07919 91 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 SLC3A2P08195 630 aaKnown RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 PFKFB1P16118 471 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 XBP1P17861 261 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 HMGB2P26583 209 aaKnown RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 TDO2P48775 406 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 NDUFA8P51970 172 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 RAB15P59190 212 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 PPARAQ07869 468 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 CHAF1AQ13111 956 aaPredicted RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 WTAPQ15007 396 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 SEC23AQ15436 765 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 ZRSR1Q15695 479 aaKnown RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 SBK1Q52WX2 424 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 RESP18Q5W5W9 173 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 C11orf57Q6ZUT1 292 aaPredicted RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 C15orf52Q6ZUT6 534 aaKnown RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 NOSTRINQ8IVI9 506 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 DHX40Q8IX18 779 aaKnown RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 BEND7Q8N7W2 519 aaPredicted RBP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 TRIML1Q8N9V2 468 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 FTOQ9C0B1 505 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL17A1-204ENST00000433822 ARMT1Q9H993 441 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 SEC31BQ9NQW1 1179 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 LRP2BPQ9P2M1 347 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 NARFQ9UHQ1 456 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 SLC4A4Q9Y6R1 1079 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 MYH6P13533 1939 aa8.54□□□□□ -1.04
COL17A1-204ENST00000433822 TAF1LQ8IZX4 1826 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 GTF2E1P29083 439 aaPredicted RBP8.53□□□□□ -1.04
COL17A1-204ENST00000433822 SYKP43405 635 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 GUCY1B3Q02153 619 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 CEBPZQ03701 1054 aaKnown RBP8.53□□□□□ -1.04
COL17A1-204ENST00000433822 ZNF827Q17R98 1081 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 CCDC178Q5BJE1 867 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 NT5DC1Q5TFE4 455 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 CCDC186Q7Z3E2 898 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 NBPF11Q86T75 865 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 MICU3Q86XE3 530 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 ZNF654Q8IZM8 581 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 LCORLQ8N3X6 602 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 CRACR2BQ8N4Y2 399 aaPredicted RBP8.53□□□□□ -1.04
COL17A1-204ENST00000433822 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
COL17A1-204ENST00000433822 CCDC150Q8NCX0 1101 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 PNMA1Q8ND90 353 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 CCDC34Q96HJ3 373 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 UBAC1Q9BSL1 405 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms