RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 PCDHA6Q9UN73 950 aa15.37■□□□□ 0.05
COL6A3-207ENST00000433762 PCDHA8Q9Y5H6 950 aa15.37■□□□□ 0.05
COL6A3-207ENST00000433762 BTAF1O14981 1849 aa15.37■□□□□ 0.05
COL6A3-207ENST00000433762 FOCADQ5VW36 1801 aa15.37■□□□□ 0.05
COL6A3-207ENST00000433762 FAM205AQ6ZU69 1335 aa15.37■□□□□ 0.05
COL6A3-207ENST00000433762 MAP2K7O14733 419 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 KLRC4O43908 158 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 PARP1P09874 1014 aaKnown RBP15.36■□□□□ 0.05
COL6A3-207ENST00000433762 CYP2D6P10635 497 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 DNM2P50570 870 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 ZNF569Q5MCW4 686 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 KRT25Q7Z3Z0 450 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 NBPF5PQ86XG9 351 aaPredicted RBP15.36■□□□□ 0.05
COL6A3-207ENST00000433762 FAM114A1Q8IWE2 563 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 EHBP1Q8NDI1 1231 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 FUT8Q9BYC5 575 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 ZMYND12Q9H0C1 365 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 CAPN11Q9UMQ6 739 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 LY75O60449 1722 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 BICDL2A1A5D9 508 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
COL6A3-207ENST00000433762 STXBP3O00186 592 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 LDHBP07195 334 aaKnown RBP15.36■□□□□ 0.05
COL6A3-207ENST00000433762 KLRK1P26718 216 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 TM4SF1P30408 202 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 KRT9P35527 623 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 CCT6AP40227 531 aaKnown RBP15.36■□□□□ 0.05
COL6A3-207ENST00000433762 UBA7P41226 1012 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 ARHGAP25P42331 645 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 IRF2BP1Q8IU81 584 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 MB21D1Q8N884 522 aa15.36■□□□□ 0.05
COL6A3-207ENST00000433762 MEA1Q16626 185 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 KIF4BQ2VIQ3 1234 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 FIGNQ5HY92 759 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 FBXO41Q8TF61 875 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 CPLX3Q8WVH0 158 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 QTRT2Q9H974 415 aaKnown RBP15.35■□□□□ 0.05
COL6A3-207ENST00000433762 TAB2Q9NYJ8 693 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 C10orf71Q711Q0 1435 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 ESYT2A0FGR8 921 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 CDK17Q00537 523 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 UBXN1Q04323 297 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 FOXR2Q6PJQ5 311 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 RPGRIP1Q96KN7 1286 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 VPS16Q9H269 839 aa15.35■□□□□ 0.05
COL6A3-207ENST00000433762 EPN1Q9Y6I3 576 aaPredicted RBP15.35■□□□□ 0.05
COL6A3-207ENST00000433762 PSMD14O00487 310 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 NDUFA10O95299 355 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 AMPD2Q01433 879 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 GPS2Q13227 327 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 TTI2Q6NXR4 508 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 SLC35F6Q8N357 371 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 C7orf25Q9BPX7 421 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 PSD3Q9NYI0 1048 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 MAGEC2Q9UBF1 373 aaPredicted RBP15.34■□□□□ 0.05
COL6A3-207ENST00000433762 LUC7L2Q9Y383 392 aaKnown RBP15.34■□□□□ 0.05
COL6A3-207ENST00000433762 ZPR1O75312 459 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 TSPY3P0CV98 308 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 TSPY8P0CW00 308 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 SRGNP10124 158 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 PLCG2P16885 1265 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 GNA11P29992 359 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 NOVP48745 357 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 KRT83P78385 493 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 AMPD3Q01432 767 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 LONRF2Q1L5Z9 754 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 TSR1Q2NL82 804 aaKnown RBP15.34■□□□□ 0.05
COL6A3-207ENST00000433762 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
COL6A3-207ENST00000433762 STAMQ92783 540 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 ANKZF1Q9H8Y5 726 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 MKNK2Q9HBH9 465 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 TFCP2L1Q9NZI6 479 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 CALCOCO1Q9P1Z2 691 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 GDAQ9Y2T3 454 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 ABCB11O95342 1321 aa15.34■□□□□ 0.05
COL6A3-207ENST00000433762 A0A1W2PQJ5 194 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 CTAGE15A4D2H0 777 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 KCNQ2O43526 872 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 SASH3O75995 380 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 CTAGE8P0CG41 777 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 FLT1P17948 1338 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 CCNE1P24864 410 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 SMC1AQ14683 1233 aaKnown RBP15.33■□□□□ 0.04
COL6A3-207ENST00000433762 ZNF804AQ7Z570 1209 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 CTAGE6Q86UF2 777 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 CTAGE4Q8IX94 777 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 IRX2Q9BZI1 471 aaPredicted RBP15.33■□□□□ 0.04
COL6A3-207ENST00000433762 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.33■□□□□ 0.04
COL6A3-207ENST00000433762 SEC31AO94979 1220 aaKnown RBP15.33■□□□□ 0.04
COL6A3-207ENST00000433762 OR52Z1P0C646 297 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 VEGFAP15692 232 aaPredicted RBP15.33■□□□□ 0.04
COL6A3-207ENST00000433762 MCM3P25205 808 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 TYW1BQ6NUM6 668 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 HDXQ7Z353 690 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 STAG2Q8N3U4 1231 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.04
COL6A3-207ENST00000433762 C6orf50Q9HD87 102 aa15.33■□□□□ 0.04
COL6A3-207ENST00000433762 PLIN4Q96Q06 1357 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms