RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 MCMDC2Q4G0Z9 681 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 PPP4R3BQ5MIZ7 849 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 SH3RF1Q7Z6J0 888 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 ZNF467Q7Z7K2 595 aaPredicted RBP25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 DEFB123Q8N688 67 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 CHURC1Q8WUH1 139 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 AGBL1Q96MI9 1066 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 FAM184BQ9ULE4 1060 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 ORC4O43929 436 aa25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 FGAP02671 866 aa25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 FDX1P10109 184 aa25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 RRP12Q5JTH9 1297 aaKnown RBP25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 C1orf53Q5VUE5 145 aa25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 GPR153Q6NV75 609 aa25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 SMC5Q8IY18 1101 aa25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 ACAD9Q9H845 621 aa25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 RNF146Q9NTX7 359 aa25.81■■□□□ 1.72
RPUSD3-206ENST00000433535 MYADML2A6NDP7 307 aa25.8■■□□□ 1.72
RPUSD3-206ENST00000433535 ADCY6O43306 1168 aa25.8■■□□□ 1.72
RPUSD3-206ENST00000433535 CNTN2Q02246 1040 aa25.8■■□□□ 1.72
RPUSD3-206ENST00000433535 TLE2Q04725 743 aa25.8■■□□□ 1.72
RPUSD3-206ENST00000433535 CCDC174Q6PII3 467 aa25.8■■□□□ 1.72
RPUSD3-206ENST00000433535 ARMCX2Q7L311 632 aa25.8■■□□□ 1.72
RPUSD3-206ENST00000433535 RILPL2Q969X0 211 aa25.8■■□□□ 1.72
RPUSD3-206ENST00000433535 LRRC37A2A6NM11 1700 aa25.8■■□□□ 1.72
RPUSD3-206ENST00000433535 TRIM43BA6NCK2 446 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 FGRP09769 529 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 HSPD1P10809 573 aaKnown RBP25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 HAND2P61296 217 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 IRX5P78411 483 aaPredicted RBP25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 ACVR2BQ13705 512 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 CCDC96Q2M329 555 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 RCSD1Q6JBY9 416 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 CCDC144CPQ8IYA2 1237 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 BADQ92934 168 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 TRIM43Q96BQ3 446 aaPredicted RBP25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 A1CFQ9NQ94 594 aaKnown RBP25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 PRR12Q9ULL5 1215 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 CCDC171Q6TFL3 1326 aa25.79■■□□□ 1.72
RPUSD3-206ENST00000433535 PLA2G6O60733 806 aa25.78■■□□□ 1.72
RPUSD3-206ENST00000433535 ALAS1P13196 640 aa25.78■■□□□ 1.72
RPUSD3-206ENST00000433535 RWDD1Q9H446 243 aaPredicted RBP25.78■■□□□ 1.72
RPUSD3-206ENST00000433535 POTEB2H3BUK9 544 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 PQBP1O60828 265 aaKnown RBP25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 IGHDP01880 384 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 NOVP48745 357 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 ACLYP53396 1101 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 AAMPQ13685 434 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 CCDC144BQ3MJ40 725 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 FAM133AQ8N9E0 248 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 KLHDC9Q8NEP7 349 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 EXOC6Q8TAG9 804 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 TRERF1Q96PN7 1200 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 ABHD16BQ9H3Z7 469 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 ZMYM6O95789 1325 aa25.77■■□□□ 1.72
RPUSD3-206ENST00000433535 LCTP09848 1927 aa25.76■■□□□ 1.72
RPUSD3-206ENST00000433535 DUSP11O75319 330 aaKnown RBP25.76■■□□□ 1.71
RPUSD3-206ENST00000433535 CLTBP09497 229 aa25.76■■□□□ 1.71
RPUSD3-206ENST00000433535 MUM1L1Q5H9M0 696 aa25.76■■□□□ 1.71
RPUSD3-206ENST00000433535 CHD1LQ86WJ1 897 aa25.76■■□□□ 1.71
RPUSD3-206ENST00000433535 TSEN34Q9BSV6 310 aaKnown RBP25.76■■□□□ 1.71
RPUSD3-206ENST00000433535 KATNBL1Q9H079 304 aa25.76■■□□□ 1.71
RPUSD3-206ENST00000433535 STARD7Q9NQZ5 370 aa25.76■■□□□ 1.71
RPUSD3-206ENST00000433535 DDX49Q9Y6V7 483 aaKnown RBP25.76■■□□□ 1.71
RPUSD3-206ENST00000433535 FRMPD2Q68DX3 1309 aaPredicted RBP25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 SOWAHBA6NEL2 793 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 C6orf222P0C671 652 aaPredicted RBP25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 ITGB8P26012 769 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 SLC16A2P36021 539 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 KCNA10Q16322 511 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 TKFCQ3LXA3 575 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 C9orf50Q5SZB4 431 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 CCSAPQ6IQ19 270 aaPredicted RBP25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 TTBK2Q6IQ55 1244 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 TBC1D10CQ8IV04 446 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 PLEKHM2Q8IWE5 1019 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 DCAF4Q8WV16 495 aa25.75■■□□□ 1.71
RPUSD3-206ENST00000433535 ASTN1O14525 1302 aa25.74■■□□□ 1.71
RPUSD3-206ENST00000433535 SHHQ15465 462 aa25.74■■□□□ 1.71
RPUSD3-206ENST00000433535 TICAM2Q86XR7 235 aa25.74■■□□□ 1.71
RPUSD3-206ENST00000433535 TMEM47Q9BQJ4 181 aa25.74■■□□□ 1.71
RPUSD3-206ENST00000433535 MTMR10Q9NXD2 777 aa25.74■■□□□ 1.71
RPUSD3-206ENST00000433535 CCPG1Q9ULG6 757 aa25.74■■□□□ 1.71
RPUSD3-206ENST00000433535 LAMA4Q16363 1823 aa25.74■■□□□ 1.71
RPUSD3-206ENST00000433535 MOXD2PA6NHM9 499 aa25.73■■□□□ 1.71
RPUSD3-206ENST00000433535 TOP1P11387 765 aaKnown RBP25.73■■□□□ 1.71
RPUSD3-206ENST00000433535 SDSP20132 328 aa25.73■■□□□ 1.71
RPUSD3-206ENST00000433535 CST5P28325 142 aaPredicted RBP25.73■■□□□ 1.71
RPUSD3-206ENST00000433535 NUCB1Q02818 461 aa25.73■■□□□ 1.71
RPUSD3-206ENST00000433535 NUP133Q8WUM0 1156 aa25.73■■□□□ 1.71
RPUSD3-206ENST00000433535 UPF3AQ9H1J1 476 aaKnown RBP25.73■■□□□ 1.71
RPUSD3-206ENST00000433535 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.72■■□□□ 1.71
RPUSD3-206ENST00000433535 RANBP17Q9H2T7 1088 aaKnown RBP25.72■■□□□ 1.71
RPUSD3-206ENST00000433535 GPCPD1Q9NPB8 672 aa25.72■■□□□ 1.71
RPUSD3-206ENST00000433535 TCP11L1Q9NUJ3 509 aa25.72■■□□□ 1.71
RPUSD3-206ENST00000433535 NEDD4P46934 1319 aa25.71■■□□□ 1.71
RPUSD3-206ENST00000433535 ICAM1P05362 532 aa25.71■■□□□ 1.71
RPUSD3-206ENST00000433535 AKNAD1Q5T1N1 836 aa25.71■■□□□ 1.71
RPUSD3-206ENST00000433535 SYDE2Q5VT97 1194 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms