RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PIK3AP1Q6ZUJ8 805 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 FERMT2Q96AC1 680 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 CCT8L2Q96SF2 557 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 IFIH1Q9BYX4 1025 aaKnown RBP12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 EPB41L5Q9HCM4 733 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 FAM153AQ9UHL3 310 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 LGALS16A8MUM7 142 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 NUTM2EB1AL46 878 aaPredicted RBP12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 RPSAP08865 295 aaKnown RBP12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 ELF1P32519 619 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 MTIF2P46199 727 aaKnown RBP12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 PPP2R5AQ15172 486 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 ALS2CLQ60I27 953 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 CCDC13Q8IYE1 715 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 OSBPL9Q96SU4 736 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 KRT23Q9C075 422 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 EPB41L4AQ9HCS5 686 aaPredicted RBP12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 MST1RQ04912 1400 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 NWD2Q9ULI1 1742 aa12.87□□□□□ -0.35
HMGCS1-202ENST00000433297 AKR1B10O60218 316 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 NR1D1P20393 614 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 STAT6P42226 847 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 PHKA1P46020 1223 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 C2CD5Q86YS7 1000 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 ORAI2Q96SN7 254 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 TUBGCP2Q9BSJ2 902 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 EPN3Q9H201 632 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 VEZTQ9HBM0 779 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 WDR17Q8IZU2 1322 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 PATL2C9JE40 543 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 NEBLO76041 1014 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 FSBPO95073 299 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 PDHBP11177 359 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 CCDC121Q6ZUS5 278 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 MMGT1Q8N4V1 131 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 TRIM58Q8NG06 486 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 RBM12Q9NTZ6 932 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 ODF2Q5BJF6 829 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 NLRP14Q86W24 1093 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 CSGALNACT2Q8N6G5 542 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 CNNM2Q9H8M5 875 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 SLC24A3Q9HC58 644 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 EXOC1Q9NV70 894 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 RMND1Q9NWS8 449 aa12.86□□□□□ -0.35
HMGCS1-202ENST00000433297 SNAP23O00161 211 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 KIF1CO43896 1103 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 PPP1R37O75864 691 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 SKOR1P84550 965 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 HAUS3Q68CZ6 603 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 SLC40A1Q9NP59 571 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 DNM2P50570 870 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 FAM207AQ9NSI2 230 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 ZNF263O14978 683 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 GLI1P08151 1106 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 UBE3CQ15386 1083 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
HMGCS1-202ENST00000433297 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 HEXIM1O94992 359 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 DDR1Q08345 913 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 TRADDQ15628 312 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 PTGISQ16647 500 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 PCDHA13Q9Y5I0 950 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 PSMA7O14818 248 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 NLRP5P59047 1200 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 IFT20Q8IY31 132 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 MMRN2Q9H8L6 949 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 HYOU1Q9Y4L1 999 aa12.84□□□□□ -0.35
HMGCS1-202ENST00000433297 GOLGA6L10A6NI86 522 aa12.83□□□□□ -0.35
HMGCS1-202ENST00000433297 A6NNZ2 444 aa12.83□□□□□ -0.35
HMGCS1-202ENST00000433297 PP2D1A8MPX8 630 aa12.83□□□□□ -0.35
HMGCS1-202ENST00000433297 PAX7P23759 505 aa12.83□□□□□ -0.35
HMGCS1-202ENST00000433297 TUBB8Q3ZCM7 444 aa12.83□□□□□ -0.35
HMGCS1-202ENST00000433297 PDXDC2PQ6P474 469 aa12.83□□□□□ -0.35
HMGCS1-202ENST00000433297 VCPKMTQ9H867 229 aa12.83□□□□□ -0.35
HMGCS1-202ENST00000433297 HAUS2Q9NVX0 235 aa12.83□□□□□ -0.35
HMGCS1-202ENST00000433297 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 LTN1O94822 1766 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 CYP27B1O15528 508 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 MDH1P40925 334 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 ZBED6P86452 979 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 SNCBQ16143 134 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms