RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 CAMTA1Q9Y6Y1 1673 aa13.95□□□□□ -0.18
LRRTM1-206ENST00000433224 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 WDHD1O75717 1129 aaPredicted RBP13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 CTDNEP1O95476 244 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 GPR162Q16538 588 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L6PQ6QN14 398 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 TMTC3Q6ZXV5 915 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 NLRC4Q9NPP4 1024 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 GYS1P13807 737 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 ADRA2BP18089 450 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 EZH2Q15910 746 aaKnown RBP13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 DNAJC21Q5F1R6 531 aaKnown RBP13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 HS2ST1Q7LGA3 356 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 FAM107BQ9H098 131 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 RABEP2Q9H5N1 569 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 SH2D4AQ9H788 454 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 UTP14CQ5TAP6 766 aaKnown RBP13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 PRAMEF18Q5VWM3 479 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 CCDC65Q8IXS2 484 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 IGDCC4Q8TDY8 1250 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
LRRTM1-206ENST00000433224 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 NF2P35240 595 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 RNASE9P60153 205 aaKnown RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 RGS22Q8NE09 1264 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 PPP1R13BQ96KQ4 1090 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 TMEM260Q9NX78 707 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 DDX25Q9UHL0 483 aaKnown RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 AKR1B15C9JRZ8 316 aaPredicted RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 RDXP35241 583 aaKnown RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 CCDC93Q567U6 631 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 PI4KBQ9UBF8 816 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 PXDNLA1KZ92 1463 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 ARHGAP6O43182 974 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 PABPC4Q13310 644 aaKnown RBP eCLIP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 PTPROQ16827 1216 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 RC3H1Q5TC82 1133 aaKnown RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 TTBK2Q6IQ55 1244 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 DPH6Q7L8W6 267 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 VPS36Q86VN1 386 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 ZNF526Q8TF50 670 aaPredicted RBP13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 GDAP1L1Q96MZ0 367 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 PCDHA4Q9UN74 947 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 SPATA31A6Q5VVP1 1343 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 TUBB4AP04350 444 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 TRAF1Q13077 416 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 SLC27A3Q5K4L6 730 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 USP49Q70CQ1 688 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 ZNF710Q8N1W2 664 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 PCDHB13Q9Y5F0 798 aa13.93□□□□□ -0.18
LRRTM1-206ENST00000433224 BCL9O00512 1426 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 DCCP43146 1447 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 GOLGA6L10A6NI86 522 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 PRPF3O43395 683 aaKnown RBP13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 TSGA10IPQ3SY00 556 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 IQCEQ6IPM2 695 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 COL23A1Q86Y22 540 aaPredicted RBP13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 MYCT1Q8N699 235 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 SAMSN1Q9NSI8 373 aaKnown RBP13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 TMOD4Q9NZQ9 345 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 KIAA1024Q9UPX6 916 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 DNM3Q9UQ16 869 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 DAGLAQ9Y4D2 1042 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 REREQ9P2R6 1566 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 GAS7O60861 476 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 GCNT3O95395 438 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 BICDL2A1A5D9 508 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 ARHGEF35A5YM69 484 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 USP17L10C9JJH3 530 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 CETN1Q12798 172 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 GPBP1Q86WP2 473 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 SLF1Q9BQI6 1058 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 KANSL2Q9H9L4 492 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 GOPCQ9HD26 462 aa13.92□□□□□ -0.18
LRRTM1-206ENST00000433224 SMC1AQ14683 1233 aaKnown RBP13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 STXBP4Q6ZWJ1 553 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 FBXO33Q7Z6M2 555 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 CEP112Q8N8E3 955 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 CHURC1Q8WUH1 139 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 CCPG1Q9ULG6 757 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 ABCC12Q96J65 1359 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 SHTN1A0MZ66 631 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 PPARDQ03181 441 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 R3HDM1Q15032 1099 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms