RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ECE1P42892 770 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 SMARCA2P51531 1590 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 SCRN1Q12765 414 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 SUZ12Q15022 739 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ALFQ53S48 1182 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 RFX8Q6ZV50 586 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CARNMT1Q8N4J0 409 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ACMSDQ8TDX5 336 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CFAP36Q96G28 342 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 RADILQ96JH8 1075 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 RBM14Q96PK6 669 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 SPZ1Q9BXG8 430 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 TRPV6Q9H1D0 765 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 RTEL1Q9NZ71 1219 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 SH3BGRL2Q9UJC5 107 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CCPG1Q9ULG6 757 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 TTLL3Q9Y4R7 772 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 TRPA1O75762 1119 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 GFAPP14136 432 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 POLR2BP30876 1174 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 PAPOLAP51003 745 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 YARSP54577 528 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 KRT83P78385 493 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 TTF1Q15361 905 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ZNF574Q6ZN55 896 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ZNF397Q8NF99 534 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 FBXO18Q8NFZ0 1043 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ZNF566Q969W8 418 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 NUDT16Q96DE0 195 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 OSBPL9Q96SU4 736 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 TTC1Q99614 292 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 TDRD1Q9BXT4 1180 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 VPS33BQ9H267 617 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CASS4Q9NQ75 786 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 C8orf4Q9NR00 106 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ZNF180Q9UJW8 692 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 NUTM2FA1L443 756 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 LRRC10BA6NIK2 292 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 POLR3DP05423 398 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 RPL17P18621 184 aaKnown RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 FUT4P22083 530 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 HOXD10P28358 340 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 GNL2Q13823 731 aaKnown RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 BRDTQ58F21 947 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 MUM1L1Q5H9M0 696 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 SMYD5Q6GMV2 418 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 HIBCHQ6NVY1 386 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 TMEM151BQ8IW70 566 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 PLD6Q8N2A8 252 aaKnown RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 TTC39CQ8N584 583 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 TMEM57Q8N5G2 664 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 OSCP1Q8WVF1 389 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 ABHD8Q96I13 439 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 CEP72Q9P209 647 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 A0A087WUV0 522 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 SYCE3A1L190 88 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 EXTL3O43909 919 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 TCEA3O75764 348 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 MYZAPP0CAP1 466 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 LRPAP1P30533 357 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 MYL6P60660 151 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 CCDC38Q502W7 563 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 WDR44Q5JSH3 913 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 DGKHQ86XP1 1220 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 LRRC49Q8IUZ0 686 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 UCMAQ8WVF2 138 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 ANKRD7Q92527 254 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 SMC6Q96SB8 1091 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 YME1L1Q96TA2 773 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 PLEKHA4Q9H4M7 779 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 PALMDQ9NP74 551 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 TCP11L1Q9NUJ3 509 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 HOXC10Q9NYD6 342 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 EVC2Q86UK5 1308 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 TMCC2O75069 709 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 TGDSO95455 350 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 HSMCR30P0CW71 290 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 CPA1P15085 419 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 CSTF3Q12996 717 aaKnown RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 GRIK3Q13003 919 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 C15orf59Q2T9L4 293 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 CEP85LQ5SZL2 805 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 SPECC1LQ69YQ0 1117 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 ZNF746Q6NUN9 644 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 GGT6Q6P531 493 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 LRRC31Q6UY01 552 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 BICDL1Q6ZP65 573 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 ARHGEF18Q6ZSZ5 1173 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 KSR1Q8IVT5 923 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 EPS8L3Q8TE67 593 aaKnown RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 GIMAP1Q8WWP7 306 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 RUFY2Q8WXA3 655 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 EFHD2Q96C19 240 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 ZCCHC17Q9NP64 241 aaKnown RBP5.91□□□□□ -1.46
PTPN4-203ENST00000430976 MALT1Q9UDY8 824 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 TMEM5Q9Y2B1 443 aa5.91□□□□□ -1.46
PTPN4-203ENST00000430976 ROCK2O75116 1388 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms