RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 TCP11X2Q5H9J9 407 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 FAM182BQ5T319 152 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 TRIML1Q8N9V2 468 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 LINC00116Q8NCU8 138 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 GLIS3Q8NEA6 775 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 RABGGTAQ92696 567 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 GOLGA1Q92805 767 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 MMS19Q96T76 1030 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 EHD2Q9NZN4 543 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 GUCA1BQ9UMX6 200 aa8.11□□□□□ -1.11
COL28A1-202ENST00000430711 ZNF263O14978 683 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 NRDCO43847 1150 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 FCER1AP12319 257 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 SCG2P13521 617 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 FECHP22830 423 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 KRT9P35527 623 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 CYP27A1Q02318 531 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 RAD51AP2Q09MP3 1159 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 INF2Q27J81 1249 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 KIF4BQ2VIQ3 1234 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 CCDC152Q4G0S7 254 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 TBC1D9BQ66K14 1250 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 KRT26Q7Z3Y9 468 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 CATIPQ7Z7H3 387 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 PPFIBP1Q86W92 1011 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 GJA10Q969M2 543 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 CAPZA3Q96KX2 299 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 NUP88Q99567 741 aaPredicted RBP8.1□□□□□ -1.11
COL28A1-202ENST00000430711 POLD4Q9HCU8 107 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 LIMA1Q9UHB6 759 aaKnown RBP8.1□□□□□ -1.11
COL28A1-202ENST00000430711 CDC23Q9UJX2 597 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 FAN1Q9Y2M0 1017 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 TNRC6CQ9HCJ0 1690 aaKnown RBP8.1□□□□□ -1.11
COL28A1-202ENST00000430711 RTL9Q8NET4 1388 aa8.1□□□□□ -1.11
COL28A1-202ENST00000430711 B4DLN1 442 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 EXOC5O00471 708 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 RPN1P04843 607 aaKnown RBP8.09□□□□□ -1.11
COL28A1-202ENST00000430711 FGRP09769 529 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 HSPA6P17066 643 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 GNAT2P19087 354 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 GTF2E1P29083 439 aaPredicted RBP8.09□□□□□ -1.11
COL28A1-202ENST00000430711 NLRP5P59047 1200 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 DHX8Q14562 1220 aaKnown RBP8.09□□□□□ -1.11
COL28A1-202ENST00000430711 FKBP15Q5T1M5 1219 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 ARFGAP3Q9NP61 516 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 VPS18Q9P253 973 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 ADAM21Q9UKJ8 722 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 FLT1P17948 1338 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 ZC3H4Q9UPT8 1303 aaKnown RBP8.09□□□□□ -1.11
COL28A1-202ENST00000430711 M0R2N6 131 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 CCP110O43303 1012 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 PARP1P09874 1014 aaKnown RBP8.09□□□□□ -1.11
COL28A1-202ENST00000430711 LMAN1P49257 510 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 NUBP1P53384 320 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 AKAP17AQ02040 695 aaKnown RBP8.09□□□□□ -1.11
COL28A1-202ENST00000430711 APBA1Q02410 837 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 UBXN1Q04323 297 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 PAK1Q13153 545 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 CLEC10AQ8IUN9 316 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 HDAC7Q8WUI4 952 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 GSDMAQ96QA5 445 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 DUSP9Q99956 384 aaKnown RBP8.09□□□□□ -1.11
COL28A1-202ENST00000430711 SRRTQ9BXP5 876 aaKnown RBP8.09□□□□□ -1.11
COL28A1-202ENST00000430711 L1RE1Q9UN81 338 aa8.09□□□□□ -1.11
COL28A1-202ENST00000430711 THSD7AQ9UPZ6 1657 aa8.09□□□□□ -1.12
COL28A1-202ENST00000430711 CCDC196A0A1B0GTZ2 297 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 PES1O00541 588 aaKnown RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 RGL2O15211 777 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 EDIL3O43854 480 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 PFKFB3Q16875 520 aaPredicted RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 MSANTD4Q8NCY6 345 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 ZNF507Q8TCN5 953 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 EHD4Q9H223 541 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 RNF41Q9H4P4 317 aaPredicted RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 ARGLU1Q9NWB6 273 aaPredicted RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 SAP30BPQ9UHR5 308 aaKnown RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 COL5A3P25940 1745 aaPredicted RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 MYH10P35580 1976 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 TULP2O00295 520 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 MYO1BO43795 1136 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 KIF5CO60282 957 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 NDUFA10O95299 355 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 STK4Q13043 487 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 ZNF658Q5TYW1 1059 aaPredicted RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 ADSSL1Q8N142 457 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 SH3RF3Q8TEJ3 882 aaPredicted RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 FERMT2Q96AC1 680 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 PSMB7Q99436 277 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 BRIP1Q9BX63 1249 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 DACH1Q9UI36 760 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 MAD2L2Q9UI95 211 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 RWDD2AQ9UIY3 292 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 HOOK1Q9UJC3 728 aaKnown RBP8.08□□□□□ -1.12
COL28A1-202ENST00000430711 RAB21Q9UL25 225 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 PCDHA6Q9UN73 950 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 CEP131Q9UPN4 1083 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 PCDHA8Q9Y5H6 950 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 CDK5RAP2Q96SN8 1893 aa8.08□□□□□ -1.12
COL28A1-202ENST00000430711 NRAPQ86VF7 1730 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms