RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 SNAP25P60880 206 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 C1orf53Q5VUE5 145 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 SH3RF1Q7Z6J0 888 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 PLEKHM2Q8IWE5 1019 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 CHST13Q8NET6 341 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 STAG1Q8WVM7 1258 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 DDX11Q96FC9 970 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 CCDC171Q6TFL3 1326 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 A0A1W2PQ45 241 aaPredicted RBP19.27■□□□□ 0.68
PTPRA-206ENST00000430705 A0A1W2PQY0 241 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 RANBP6O60518 1105 aaKnown RBP19.27■□□□□ 0.68
PTPRA-206ENST00000430705 CNTN2Q02246 1040 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 NUCB1Q02818 461 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 AAMPQ13685 434 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 CCSAPQ6IQ19 270 aaPredicted RBP19.27■□□□□ 0.68
PTPRA-206ENST00000430705 Q7L0L9 218 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 FAM160B2Q86V87 743 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 TBC1D10CQ8IV04 446 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 FAM133AQ8N9E0 248 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 A1CFQ9NQ94 594 aaKnown RBP19.27■□□□□ 0.68
PTPRA-206ENST00000430705 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.27■□□□□ 0.68
PTPRA-206ENST00000430705 ZHX1Q9UKY1 873 aaPredicted RBP19.27■□□□□ 0.68
PTPRA-206ENST00000430705 PRR12Q9ULL5 1215 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 CNPY2Q9Y2B0 182 aa19.27■□□□□ 0.68
PTPRA-206ENST00000430705 DDX49Q9Y6V7 483 aaKnown RBP19.27■□□□□ 0.68
PTPRA-206ENST00000430705 TRIM43BA6NCK2 446 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 HAND2P61296 217 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 RCSD1Q6JBY9 416 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 CHD1LQ86WJ1 897 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 TICAM2Q86XR7 235 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 ANKRD35Q8N283 1001 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 KLHDC9Q8NEP7 349 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 TRIM43Q96BQ3 446 aaPredicted RBP19.26■□□□□ 0.67
PTPRA-206ENST00000430705 OSBPL3Q9H4L5 887 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 RNF146Q9NTX7 359 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 FBXO40Q9UH90 709 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 CTDP1Q9Y5B0 961 aaPredicted RBP19.26■□□□□ 0.67
PTPRA-206ENST00000430705 CDH23Q9H251 3354 aa19.26■□□□□ 0.67
PTPRA-206ENST00000430705 SOWAHBA6NEL2 793 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 TRIM6-TRIM34B2RNG4 842 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 FDX1P10109 184 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 ITGB8P26012 769 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 ACVR2BQ13705 512 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 MUM1L1Q5H9M0 696 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 TTBK2Q6IQ55 1244 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 CCDC174Q6PII3 467 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 ARMCX2Q7L311 632 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 RNF180Q86T96 592 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 CHURC1Q8WUH1 139 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 ACAD9Q9H845 621 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
PTPRA-206ENST00000430705 MTMR7Q9Y216 660 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 EYSQ5T1H1 3165 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 NEDD4P46934 1319 aa19.25■□□□□ 0.67
PTPRA-206ENST00000430705 SDSP20132 328 aa19.24■□□□□ 0.67
PTPRA-206ENST00000430705 TLE2Q04725 743 aa19.24■□□□□ 0.67
PTPRA-206ENST00000430705 RRP12Q5JTH9 1297 aaKnown RBP19.24■□□□□ 0.67
PTPRA-206ENST00000430705 GPR153Q6NV75 609 aa19.24■□□□□ 0.67
PTPRA-206ENST00000430705 CCDC144CPQ8IYA2 1237 aa19.24■□□□□ 0.67
PTPRA-206ENST00000430705 RILPL2Q969X0 211 aa19.24■□□□□ 0.67
PTPRA-206ENST00000430705 TMEM47Q9BQJ4 181 aa19.24■□□□□ 0.67
PTPRA-206ENST00000430705 RWDD1Q9H446 243 aaPredicted RBP19.24■□□□□ 0.67
PTPRA-206ENST00000430705 PRDM5Q9NQX1 630 aaPredicted RBP19.24■□□□□ 0.67
PTPRA-206ENST00000430705 FAM184BQ9ULE4 1060 aa19.24■□□□□ 0.67
PTPRA-206ENST00000430705 CTAGE5O15320 804 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 PTGS1P23219 599 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 ACLYP53396 1101 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
PTPRA-206ENST00000430705 CCDC144BQ3MJ40 725 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 PPP4R3BQ5MIZ7 849 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 C9orf50Q5SZB4 431 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 DCAF4Q8WV16 495 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 BADQ92934 168 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 TRERF1Q96PN7 1200 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 UPF3AQ9H1J1 476 aaKnown RBP19.23■□□□□ 0.67
PTPRA-206ENST00000430705 RANBP17Q9H2T7 1088 aaKnown RBP19.23■□□□□ 0.67
PTPRA-206ENST00000430705 TCP11L1Q9NUJ3 509 aa19.23■□□□□ 0.67
PTPRA-206ENST00000430705 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.22■□□□□ 0.67
PTPRA-206ENST00000430705 DUSP11O75319 330 aaKnown RBP19.22■□□□□ 0.67
PTPRA-206ENST00000430705 ALAS1P13196 640 aa19.22■□□□□ 0.67
PTPRA-206ENST00000430705 CST5P28325 142 aaPredicted RBP19.22■□□□□ 0.67
PTPRA-206ENST00000430705 SLC16A2P36021 539 aa19.22■□□□□ 0.67
PTPRA-206ENST00000430705 CCDC96Q2M329 555 aa19.22■□□□□ 0.67
PTPRA-206ENST00000430705 BTNL9Q6UXG8 535 aa19.22■□□□□ 0.67
PTPRA-206ENST00000430705 DEFB123Q8N688 67 aa19.22■□□□□ 0.67
PTPRA-206ENST00000430705 PURBQ96QR8 312 aaKnown RBP19.22■□□□□ 0.67
PTPRA-206ENST00000430705 LBHD1Q9BQE6 289 aaPredicted RBP19.22■□□□□ 0.67
PTPRA-206ENST00000430705 TSEN34Q9BSV6 310 aaKnown RBP19.22■□□□□ 0.67
PTPRA-206ENST00000430705 IL25Q9H293 177 aa19.22■□□□□ 0.67
PTPRA-206ENST00000430705 ABHD16BQ9H3Z7 469 aa19.22■□□□□ 0.67
PTPRA-206ENST00000430705 TOMM22Q9NS69 142 aa19.22■□□□□ 0.67
PTPRA-206ENST00000430705 FRMPD2Q68DX3 1309 aaPredicted RBP19.22■□□□□ 0.67
PTPRA-206ENST00000430705 UNC80Q8N2C7 3258 aa19.21■□□□□ 0.67
PTPRA-206ENST00000430705 POTEB2H3BUK9 544 aa19.21■□□□□ 0.67
PTPRA-206ENST00000430705 TOP1P11387 765 aaKnown RBP19.21■□□□□ 0.67
PTPRA-206ENST00000430705 KCNA10Q16322 511 aa19.21■□□□□ 0.67
PTPRA-206ENST00000430705 TKFCQ3LXA3 575 aa19.21■□□□□ 0.67
PTPRA-206ENST00000430705 AKNAD1Q5T1N1 836 aa19.21■□□□□ 0.67
PTPRA-206ENST00000430705 CYP39A1Q9NYL5 469 aa19.21■□□□□ 0.67
PTPRA-206ENST00000430705 PRKAG2Q9UGJ0 569 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 220.7 ms