RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 ZBTB5O15062 677 aa19.71■□□□□ 0.75
LINC00887-203ENST00000429578 PDIA4P13667 645 aaKnown RBP19.71■□□□□ 0.75
LINC00887-203ENST00000429578 MKRN3Q13064 507 aaKnown RBP19.71■□□□□ 0.75
LINC00887-203ENST00000429578 COG2Q14746 738 aa19.71■□□□□ 0.75
LINC00887-203ENST00000429578 AIFM3Q96NN9 605 aa19.71■□□□□ 0.75
LINC00887-203ENST00000429578 PPP1R9AQ9ULJ8 1098 aa19.71■□□□□ 0.75
LINC00887-203ENST00000429578 SYT1P21579 422 aa19.71■□□□□ 0.75
LINC00887-203ENST00000429578 CDC37Q16543 378 aaPredicted RBP19.71■□□□□ 0.75
LINC00887-203ENST00000429578 RANBP17Q9H2T7 1088 aaKnown RBP19.71■□□□□ 0.75
LINC00887-203ENST00000429578 SAGE1Q9NXZ1 904 aa19.71■□□□□ 0.75
LINC00887-203ENST00000429578 MYPNQ86TC9 1320 aa19.7■□□□□ 0.74
LINC00887-203ENST00000429578 CCL15-CCL14A0A0B4J2E2 113 aa19.7■□□□□ 0.74
LINC00887-203ENST00000429578 CCL15Q16663 113 aa19.7■□□□□ 0.74
LINC00887-203ENST00000429578 GPAT2Q6NUI2 795 aa19.7■□□□□ 0.74
LINC00887-203ENST00000429578 REM2Q8IYK8 340 aaPredicted RBP19.7■□□□□ 0.74
LINC00887-203ENST00000429578 RGS22Q8NE09 1264 aa19.7■□□□□ 0.74
LINC00887-203ENST00000429578 C8orf76Q96K31 380 aa19.7■□□□□ 0.74
LINC00887-203ENST00000429578 CIZ1Q9ULV3 898 aaPredicted RBP19.7■□□□□ 0.74
LINC00887-203ENST00000429578 hCG_1984214I3L0E3 225 aa19.69■□□□□ 0.74
LINC00887-203ENST00000429578 TRPA1O75762 1119 aa19.69■□□□□ 0.74
LINC00887-203ENST00000429578 FDX1P10109 184 aa19.69■□□□□ 0.74
LINC00887-203ENST00000429578 DSG3P32926 999 aa19.69■□□□□ 0.74
LINC00887-203ENST00000429578 PABPC4Q13310 644 aaKnown RBP eCLIP19.69■□□□□ 0.74
LINC00887-203ENST00000429578 QRICH1Q2TAL8 776 aa19.69■□□□□ 0.74
LINC00887-203ENST00000429578 ZNF713Q8N859 430 aaPredicted RBP19.69■□□□□ 0.74
LINC00887-203ENST00000429578 RNF186Q9NXI6 227 aa19.69■□□□□ 0.74
LINC00887-203ENST00000429578 HOXC10Q9NYD6 342 aa19.69■□□□□ 0.74
LINC00887-203ENST00000429578 MYH15Q9Y2K3 1946 aa19.69■□□□□ 0.74
LINC00887-203ENST00000429578 STX6O43752 255 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 XBP1P17861 261 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 WWC2Q6AWC2 1192 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
LINC00887-203ENST00000429578 FBXO18Q8NFZ0 1043 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 BRI3BPQ8WY22 251 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 GPKOWQ92917 476 aaPredicted RBP eCLIP19.68■□□□□ 0.74
LINC00887-203ENST00000429578 SH3GLB2Q9NR46 395 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 GJB4Q9NTQ9 266 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 BARHL2Q9NY43 387 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 ADAMTS5Q9UNA0 930 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 RBBP6Q7Z6E9 1792 aaKnown RBP19.68■□□□□ 0.74
LINC00887-203ENST00000429578 TESPA1A2RU30 521 aaPredicted RBP19.68■□□□□ 0.74
LINC00887-203ENST00000429578 PPP1R11O60927 126 aaPredicted RBP19.68■□□□□ 0.74
LINC00887-203ENST00000429578 SNAP25P60880 206 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 TRIM29Q14134 588 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 HEATR3Q7Z4Q2 680 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 ABHD8Q96I13 439 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 SLC38A10Q9HBR0 1119 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 VPS54Q9P1Q0 977 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 SLC45A1Q9Y2W3 748 aa19.68■□□□□ 0.74
LINC00887-203ENST00000429578 MANSC4A6NHS7 340 aaPredicted RBP19.67■□□□□ 0.74
LINC00887-203ENST00000429578 H3BQV1 296 aa19.67■□□□□ 0.74
LINC00887-203ENST00000429578 VWA5AO00534 786 aa19.67■□□□□ 0.74
LINC00887-203ENST00000429578 FOSBP53539 338 aa19.67■□□□□ 0.74
LINC00887-203ENST00000429578 IRX3P78415 501 aaPredicted RBP19.67■□□□□ 0.74
LINC00887-203ENST00000429578 NUCB2P80303 420 aa19.67■□□□□ 0.74
LINC00887-203ENST00000429578 PKP1Q13835 747 aa19.67■□□□□ 0.74
LINC00887-203ENST00000429578 FAM177A1Q8N128 213 aaPredicted RBP19.67■□□□□ 0.74
LINC00887-203ENST00000429578 ATG4CQ96DT6 458 aa19.67■□□□□ 0.74
LINC00887-203ENST00000429578 AMNQ9BXJ7 453 aa19.67■□□□□ 0.74
LINC00887-203ENST00000429578 ASCC2Q9H1I8 757 aaPredicted RBP19.67■□□□□ 0.74
LINC00887-203ENST00000429578 CHMP5Q9NZZ3 219 aa19.67■□□□□ 0.74
LINC00887-203ENST00000429578 SPDYE16A6NNV3 312 aaPredicted RBP19.66■□□□□ 0.74
LINC00887-203ENST00000429578 OSBPP22059 807 aa19.66■□□□□ 0.74
LINC00887-203ENST00000429578 KRT40Q6A162 431 aa19.66■□□□□ 0.74
LINC00887-203ENST00000429578 ANKRD23Q86SG2 305 aa19.66■□□□□ 0.74
LINC00887-203ENST00000429578 FBXO11Q86XK2 927 aa19.66■□□□□ 0.74
LINC00887-203ENST00000429578 SHISA4Q96DD7 197 aa19.66■□□□□ 0.74
LINC00887-203ENST00000429578 TCHHQ07283 1943 aa19.66■□□□□ 0.74
LINC00887-203ENST00000429578 CASP8AP2Q9UKL3 1982 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 VPS37CA5D8V6 355 aaPredicted RBP19.65■□□□□ 0.74
LINC00887-203ENST00000429578 BTBD19C9JJ37 291 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 STXBP3O00186 592 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 ZBED4O75132 1171 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 TRAF1Q13077 416 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 TYW1BQ6NUM6 668 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 CCDC148Q8NFR7 591 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 CCDC12Q8WUD4 166 aaPredicted RBP19.65■□□□□ 0.74
LINC00887-203ENST00000429578 PNMA3Q9UL41 463 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 MTMR6Q9Y217 621 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 INHBEP58166 350 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 GUCY1B3Q02153 619 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 OTUD7BQ6GQQ9 843 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 CCDC174Q6PII3 467 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 LBX2Q6XYB7 198 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 COA7Q96BR5 231 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 P2RX7Q99572 595 aaKnown RBP19.65■□□□□ 0.74
LINC00887-203ENST00000429578 PTPN18Q99952 460 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 PHF20Q9BVI0 1012 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 PCDHA1Q9Y5I3 950 aa19.65■□□□□ 0.74
LINC00887-203ENST00000429578 ZNF536O15090 1300 aa19.64■□□□□ 0.74
LINC00887-203ENST00000429578 PDHXO00330 501 aa19.64■□□□□ 0.73
LINC00887-203ENST00000429578 MMP1P03956 469 aa19.64■□□□□ 0.73
LINC00887-203ENST00000429578 ICAM1P05362 532 aa19.64■□□□□ 0.73
LINC00887-203ENST00000429578 NAPAP54920 295 aa19.64■□□□□ 0.73
LINC00887-203ENST00000429578 PPP1R18Q6NYC8 613 aa19.64■□□□□ 0.73
LINC00887-203ENST00000429578 REPS2Q8NFH8 660 aa19.64■□□□□ 0.73
LINC00887-203ENST00000429578 PNMA2Q9UL42 364 aa19.64■□□□□ 0.73
LINC00887-203ENST00000429578 KCNJ14Q9UNX9 436 aa19.64■□□□□ 0.73
LINC00887-203ENST00000429578 CTDP1Q9Y5B0 961 aaPredicted RBP19.64■□□□□ 0.73
LINC00887-203ENST00000429578 BRD1O95696 1058 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms