RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 KRT18P05783 430 aaKnown RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 EPS15P42566 896 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 PLA2G4AP47712 749 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 NKX1-1Q15270 411 aaPredicted RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 CACNA2D4Q7Z3S7 1137 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 HPS3Q969F9 1004 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 RUFY1Q96T51 708 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 FAM207AQ9NSI2 230 aaPredicted RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 BMP15O95972 392 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 CALM1P0DP23 149 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 CALM2P0DP24 149 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 CALM3P0DP25 149 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 MECOMQ03112 1051 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 SPAG1Q07617 926 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 TBC1D9BQ66K14 1250 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 CNBD1Q8NA66 436 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 PLA2G12BQ9BX93 195 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 UBA5Q9GZZ9 404 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 RBM28Q9NW13 759 aaKnown RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 TBC1D7Q9P0N9 293 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 ABCC12Q96J65 1359 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 PLCH1Q4KWH8 1693 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 CDHR2Q9BYE9 1310 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 MFAP3LO75121 409 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 ABL1P00519 1130 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 SERPINB2P05120 415 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 ERCC5P28715 1186 aaPredicted RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 TECP42680 631 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 NFIXQ14938 502 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 CYP26C1Q6V0L0 522 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 SRGAP1Q7Z6B7 1085 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 BLIDQ8IZY5 108 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 STAG2Q8N3U4 1231 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 TRIML1Q8N9V2 468 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 RMND1Q9NWS8 449 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 CDC23Q9UJX2 597 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 PHRF1Q9P1Y6 1649 aaKnown RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 WDR19Q8NEZ3 1342 aa9.02□□□□□ -0.96
HPS4-205ENST00000429411 H2AFXP16104 143 aaPredicted RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 PRCPP42785 496 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 FOXD4Q12950 439 aaPredicted RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 PARP10Q53GL7 1025 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 TRMT1LQ7Z2T5 733 aaKnown RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 TMTC1Q8IUR5 882 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 GSPT2Q8IYD1 628 aaKnown RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 VGLL2Q8N8G2 317 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 GSDMAQ96QA5 445 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 NOC4LQ9BVI4 516 aaKnown RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 ABCB6Q9NP58 842 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 BCL9O00512 1426 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 TNNI2P48788 182 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 RPS8P62241 208 aaKnown RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 RINLQ6ZS11 566 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 CCDC42Q96M95 316 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.02□□□□□ -0.97
HPS4-205ENST00000429411 SLC39A2Q9NP94 309 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 CWC15Q9P013 229 aaKnown RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 BIN2Q9UBW5 565 aaPredicted RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 MRFAP1Q9Y605 127 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 EPN1Q9Y6I3 576 aaPredicted RBP9.02□□□□□ -0.97
HPS4-205ENST00000429411 RIC1Q4ADV7 1423 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 TUBGCP6Q96RT7 1819 aa9.02□□□□□ -0.97
HPS4-205ENST00000429411 C6orf229H3BNL8 230 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 LDHBP07195 334 aaKnown RBP9.01□□□□□ -0.97
HPS4-205ENST00000429411 PARP1P09874 1014 aaKnown RBP9.01□□□□□ -0.97
HPS4-205ENST00000429411 GYS1P13807 737 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 CALML3P27482 149 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 CXCR5P32302 372 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 NR1I3Q14994 352 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 ALX1Q15699 326 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 TYW1BQ6NUM6 668 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 INTS5Q6P9B9 1019 aaKnown RBP9.01□□□□□ -0.97
HPS4-205ENST00000429411 CTR9Q6PD62 1173 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 RASGRP2Q7LDG7 609 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 HDXQ7Z353 690 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 RABGGTAQ92696 567 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 TMX4Q9H1E5 349 aaPredicted RBP9.01□□□□□ -0.97
HPS4-205ENST00000429411 TTF2Q9UNY4 1162 aaKnown RBP9.01□□□□□ -0.97
HPS4-205ENST00000429411 STK36Q9NRP7 1315 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 GYPCP04921 128 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 ZSCAN26Q16670 478 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 C3orf67Q6ZVT6 689 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 TMTC3Q6ZXV5 915 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 FCHSD1Q86WN1 690 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 JAKMIP2Q96AA8 810 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 MYO6Q9UM54 1294 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 FAN1Q9Y2M0 1017 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 LMO7Q8WWI1 1683 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 PRPF3O43395 683 aaKnown RBP9.01□□□□□ -0.97
HPS4-205ENST00000429411 SASH3O75995 380 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 KIF5AQ12840 1032 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 TXLNBQ8N3L3 684 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 ZNF513Q8N8E2 541 aaPredicted RBP9.01□□□□□ -0.97
HPS4-205ENST00000429411 FLAD1Q8NFF5 587 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 OR8K1Q8NGG5 319 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms