RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 FANCBQ8NB91 859 aa25.98■■□□□ 1.75
PTPN18-205ENST00000428843 AGBL1Q96MI9 1066 aa25.98■■□□□ 1.75
PTPN18-205ENST00000428843 VAT1LQ9HCJ6 419 aa25.98■■□□□ 1.75
PTPN18-205ENST00000428843 MYH6P13533 1939 aa25.97■■□□□ 1.75
PTPN18-205ENST00000428843 DHX16O60231 1041 aaKnown RBP25.97■■□□□ 1.75
PTPN18-205ENST00000428843 GNRH1P01148 92 aa25.97■■□□□ 1.75
PTPN18-205ENST00000428843 PLEKHH3Q7Z736 793 aa25.97■■□□□ 1.75
PTPN18-205ENST00000428843 COA7Q96BR5 231 aa25.97■■□□□ 1.75
PTPN18-205ENST00000428843 JMJD4Q9H9V9 463 aa25.97■■□□□ 1.75
PTPN18-205ENST00000428843 CWC22Q9HCG8 908 aaKnown RBP25.97■■□□□ 1.75
PTPN18-205ENST00000428843 RIPK3Q9Y572 518 aa25.97■■□□□ 1.75
PTPN18-205ENST00000428843 PLXNB2O15031 1838 aa25.97■■□□□ 1.75
PTPN18-205ENST00000428843 GOLGA8AA7E2F4 631 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 GOLGA8BA8MQT2 603 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 HOXD10P28358 340 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 GNAQP50148 359 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 RCAN1P53805 252 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 EVCP57679 992 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 CDC37Q16543 378 aaPredicted RBP25.96■■□□□ 1.75
PTPN18-205ENST00000428843 TBC1D32Q96NH3 1257 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 LARP6Q9BRS8 491 aaKnown RBP25.96■■□□□ 1.75
PTPN18-205ENST00000428843 ALDH8A1Q9H2A2 487 aaPredicted RBP25.96■■□□□ 1.75
PTPN18-205ENST00000428843 MROH8Q9H579 483 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 SMCHD1A6NHR9 2005 aa25.96■■□□□ 1.75
PTPN18-205ENST00000428843 BAZ2BQ9UIF8 2168 aaKnown RBP25.96■■□□□ 1.75
PTPN18-205ENST00000428843 CYTH3O43739 400 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 PLEKHA8P1O95397 391 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 ICAM1P05362 532 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 COPB2P35606 906 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 NEK4P51957 841 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 RTN1Q16799 776 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 RIOX1Q9H6W3 641 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 SRRDQ9UH36 339 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 CCPG1Q9ULG6 757 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 GABRQQ9UN88 632 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 HPS5Q9UPZ3 1129 aa25.95■■□□□ 1.74
PTPN18-205ENST00000428843 TAL1P17542 331 aaPredicted RBP25.94■■□□□ 1.74
PTPN18-205ENST00000428843 METAP2P50579 478 aaKnown RBP eCLIP25.94■■□□□ 1.74
PTPN18-205ENST00000428843 AK2P54819 239 aa25.94■■□□□ 1.74
PTPN18-205ENST00000428843 PRKCZQ05513 592 aa25.94■■□□□ 1.74
PTPN18-205ENST00000428843 SRBD1Q8N5C6 995 aaKnown RBP25.94■■□□□ 1.74
PTPN18-205ENST00000428843 MTMR8Q96EF0 704 aa25.94■■□□□ 1.74
PTPN18-205ENST00000428843 LZTS2Q9BRK4 669 aa25.94■■□□□ 1.74
PTPN18-205ENST00000428843 RBM28Q9NW13 759 aaKnown RBP25.94■■□□□ 1.74
PTPN18-205ENST00000428843 PTPREP23469 700 aa25.93■■□□□ 1.74
PTPN18-205ENST00000428843 PDIA3P30101 505 aaKnown RBP25.93■■□□□ 1.74
PTPN18-205ENST00000428843 QRICH1Q2TAL8 776 aa25.93■■□□□ 1.74
PTPN18-205ENST00000428843 COL13A1Q5TAT6 717 aaPredicted RBP25.93■■□□□ 1.74
PTPN18-205ENST00000428843 TMTC3Q6ZXV5 915 aa25.93■■□□□ 1.74
PTPN18-205ENST00000428843 CMTR1Q8N1G2 835 aaKnown RBP25.93■■□□□ 1.74
PTPN18-205ENST00000428843 SPZ1Q9BXG8 430 aa25.93■■□□□ 1.74
PTPN18-205ENST00000428843 FAM217BQ9NTX9 383 aaPredicted RBP25.93■■□□□ 1.74
PTPN18-205ENST00000428843 GJD2Q9UKL4 321 aa25.93■■□□□ 1.74
PTPN18-205ENST00000428843 PTPN22Q9Y2R2 807 aa25.93■■□□□ 1.74
PTPN18-205ENST00000428843 IVNS1ABPQ9Y6Y0 642 aa25.93■■□□□ 1.74
PTPN18-205ENST00000428843 NID2Q14112 1375 aa25.93■■□□□ 1.74
PTPN18-205ENST00000428843 ZNFX1Q9P2E3 1918 aaKnown RBP25.92■■□□□ 1.74
PTPN18-205ENST00000428843 ALAS1P13196 640 aa25.92■■□□□ 1.74
PTPN18-205ENST00000428843 SMARCA1P28370 1054 aa25.92■■□□□ 1.74
PTPN18-205ENST00000428843 CDC27P30260 824 aa25.92■■□□□ 1.74
PTPN18-205ENST00000428843 PRMT2P55345 433 aa25.92■■□□□ 1.74
PTPN18-205ENST00000428843 ANKRD1Q15327 319 aa25.92■■□□□ 1.74
PTPN18-205ENST00000428843 TKFCQ3LXA3 575 aa25.92■■□□□ 1.74
PTPN18-205ENST00000428843 HOMER2Q9NSB8 354 aa25.92■■□□□ 1.74
PTPN18-205ENST00000428843 SLC15A5A6NIM6 579 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 FLT3LGP49771 235 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 PKN2Q16513 984 aaKnown RBP25.91■■□□□ 1.74
PTPN18-205ENST00000428843 MORN1Q5T089 497 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 HOMER1Q86YM7 354 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 CHST13Q8NET6 341 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 ZNF274Q96GC6 653 aaPredicted RBP25.91■■□□□ 1.74
PTPN18-205ENST00000428843 TRERF1Q96PN7 1200 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 PIGSQ96S52 555 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 NUDT12Q9BQG2 462 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 RNF146Q9NTX7 359 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 ZNF236Q9UL36 1845 aa25.91■■□□□ 1.74
PTPN18-205ENST00000428843 ZBTB5O15062 677 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 STRNO43815 780 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 FCER1AP12319 257 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 GRB14Q14449 540 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 PPP2R5BQ15173 497 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 CCDC82Q8N4S0 544 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 SOCS4Q8WXH5 440 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 PIBF1Q8WXW3 757 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 MMP19Q99542 508 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 FBXO40Q9UH90 709 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 PNMA2Q9UL42 364 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 PTCH2Q9Y6C5 1203 aa25.9■■□□□ 1.74
PTPN18-205ENST00000428843 ADD1P35611 737 aaKnown RBP25.89■■□□□ 1.74
PTPN18-205ENST00000428843 CCT2P78371 535 aaKnown RBP25.89■■□□□ 1.74
PTPN18-205ENST00000428843 USH1GQ495M9 461 aa25.89■■□□□ 1.74
PTPN18-205ENST00000428843 MUM1L1Q5H9M0 696 aa25.89■■□□□ 1.74
PTPN18-205ENST00000428843 FBXO46Q6PJ61 603 aaPredicted RBP25.89■■□□□ 1.74
PTPN18-205ENST00000428843 FBXO11Q86XK2 927 aa25.89■■□□□ 1.74
PTPN18-205ENST00000428843 ABRAQ8N0Z2 381 aa25.89■■□□□ 1.74
PTPN18-205ENST00000428843 USP6NLQ92738 828 aa25.89■■□□□ 1.74
PTPN18-205ENST00000428843 MCOLN1Q9GZU1 580 aa25.89■■□□□ 1.74
PTPN18-205ENST00000428843 ACAD9Q9H845 621 aa25.89■■□□□ 1.74
PTPN18-205ENST00000428843 TPCN1Q9ULQ1 816 aa25.89■■□□□ 1.74
PTPN18-205ENST00000428843 CCDC196A0A1B0GTZ2 297 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms