RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 GTF3C6Q969F1 213 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 TMEM47Q9BQJ4 181 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 GOLGA8BA8MQT2 603 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 STX6O43752 255 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 LARGE1O95461 756 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 ECE1P42892 770 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 CST9Q5W186 159 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 MICU3Q86XE3 530 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 MSL3Q8N5Y2 521 aaKnown RBP12.98□□□□□ -0.33
CECR3-201ENST00000428828 C2orf69Q8N8R5 385 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 RBM46Q8TBY0 533 aaKnown RBP12.98□□□□□ -0.33
CECR3-201ENST00000428828 NUP133Q8WUM0 1156 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 CEP89Q96ST8 783 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 TRIM5Q9C035 493 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 CBX8Q9HC52 389 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 SNCAIPQ9Y6H5 919 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.97□□□□□ -0.33
CECR3-201ENST00000428828 TRIM66O15016 1216 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 PTPRAP18433 802 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 ACTN2P35609 894 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 LIFRP42702 1097 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 DGKHQ86XP1 1220 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 BANK1Q8NDB2 785 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 PPM1EQ8WY54 764 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 ZNF592Q92610 1267 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 MTA3Q9BTC8 594 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 AGXT2Q9BYV1 514 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 ARHGEF10LQ9HCE6 1279 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 MED4Q9NPJ6 270 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
CECR3-201ENST00000428828 BAZ2BQ9UIF8 2168 aaKnown RBP12.96□□□□□ -0.33
CECR3-201ENST00000428828 TRIM75PA6NK02 468 aa12.96□□□□□ -0.33
CECR3-201ENST00000428828 USP17L5A8MUK1 530 aa12.96□□□□□ -0.33
CECR3-201ENST00000428828 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
CECR3-201ENST00000428828 TOP1P11387 765 aaKnown RBP12.96□□□□□ -0.33
CECR3-201ENST00000428828 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
CECR3-201ENST00000428828 NOL9Q5SY16 702 aaKnown RBP12.96□□□□□ -0.33
CECR3-201ENST00000428828 APOA5Q6Q788 366 aa12.96□□□□□ -0.33
CECR3-201ENST00000428828 CATIPQ7Z7H3 387 aa12.96□□□□□ -0.33
CECR3-201ENST00000428828 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
CECR3-201ENST00000428828 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.33
CECR3-201ENST00000428828 ALDH8A1Q9H2A2 487 aaPredicted RBP12.96□□□□□ -0.33
CECR3-201ENST00000428828 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
CECR3-201ENST00000428828 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.33
CECR3-201ENST00000428828 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.33
CECR3-201ENST00000428828 A0A1W2PRG0 241 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 DTNBO60941 627 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 GSDMDP57764 484 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 DGKZQ13574 1117 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 ME3Q16798 604 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 SIAH1Q8IUQ4 282 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 TMTC2Q8N394 836 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 NECAB1Q8N987 351 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 NYAP2Q9P242 653 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 NRBP1Q9UHY1 535 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 LCMT1Q9UIC8 334 aa12.96□□□□□ -0.34
CECR3-201ENST00000428828 PARP14Q460N5 1801 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 ZBTB43O43298 467 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 SATB1Q01826 763 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 MTMR2Q13614 643 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 SPICE1Q8N0Z3 855 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 FBXL16Q8N461 479 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 ZBTB9Q96C00 473 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 AS3MTQ9HBK9 375 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 NCOA5Q9HCD5 579 aaKnown RBP12.95□□□□□ -0.34
CECR3-201ENST00000428828 ORC3Q9UBD5 711 aaPredicted RBP12.95□□□□□ -0.34
CECR3-201ENST00000428828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.34
CECR3-201ENST00000428828 LOC285556D6RIA3 1793 aa12.95□□□□□ -0.34
CECR3-201ENST00000428828 GOLGA8AA7E2F4 631 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 SKILP12757 684 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 SYT1P21579 422 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 PDIA3P30101 505 aaKnown RBP12.94□□□□□ -0.34
CECR3-201ENST00000428828 METAP2P50579 478 aaKnown RBP eCLIP12.94□□□□□ -0.34
CECR3-201ENST00000428828 HUNKP57058 714 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 FKBP1BP68106 108 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 MKRN3Q13064 507 aaKnown RBP12.94□□□□□ -0.34
CECR3-201ENST00000428828 SPP2Q13103 211 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 ERCC6LQ2NKX8 1250 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 CT47A1Q5JQC4 288 aaPredicted RBP12.94□□□□□ -0.34
CECR3-201ENST00000428828 LUZP1Q86V48 1076 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 TACO1Q9BSH4 297 aaKnown RBP12.94□□□□□ -0.34
CECR3-201ENST00000428828 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 FRMPD2Q68DX3 1309 aaPredicted RBP12.94□□□□□ -0.34
CECR3-201ENST00000428828 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 NOVP48745 357 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 CCZ1BP86790 482 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 CCZ1P86791 482 aaPredicted RBP12.94□□□□□ -0.34
CECR3-201ENST00000428828 CCDC144BQ3MJ40 725 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms