RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
CRIM1-204ENST00000428774 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
CRIM1-204ENST00000428774 ZSCAN16Q9H4T2 348 aaPredicted RBP12.49□□□□□ -0.41
CRIM1-204ENST00000428774 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
CRIM1-204ENST00000428774 KCNH4Q9UQ05 1017 aa12.49□□□□□ -0.41
CRIM1-204ENST00000428774 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
CRIM1-204ENST00000428774 A0A0G2JLL6 359 aaPredicted RBP12.48□□□□□ -0.41
CRIM1-204ENST00000428774 ESYT2A0FGR8 921 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 FAM205CA6NFA0 338 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 RASSF10A6NK89 507 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 FAM155AB1AL88 458 aaPredicted RBP12.48□□□□□ -0.41
CRIM1-204ENST00000428774 BTBD18B2RXH4 712 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 IRF6O14896 467 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 AOC2O75106 756 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.415e-10■■■□□ 14.9
CRIM1-204ENST00000428774 KRT2P35908 639 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 ZNF157P51786 506 aaPredicted RBP12.48□□□□□ -0.41
CRIM1-204ENST00000428774 NLRP5P59047 1200 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 DNM1Q05193 864 aaKnown RBP12.48□□□□□ -0.41
CRIM1-204ENST00000428774 NFKBIBQ15653 356 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 RGMBQ6NW40 437 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 PPP1R18Q6NYC8 613 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 PRRT2Q7Z6L0 340 aaPredicted RBP12.48□□□□□ -0.41
CRIM1-204ENST00000428774 DAGLBQ8NCG7 672 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 KIFC2Q96AC6 838 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 WNK4Q96J92 1243 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 SLF1Q9BQI6 1058 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 TMOD4Q9NZQ9 345 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 CNPY2Q9Y2B0 182 aa12.48□□□□□ -0.41
CRIM1-204ENST00000428774 UNCXA6NJT0 531 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 M0R2N6 131 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 SLC10A3P09131 477 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 SAFBQ15424 915 aaKnown RBP eCLIP12.47□□□□□ -0.41
CRIM1-204ENST00000428774 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
CRIM1-204ENST00000428774 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
CRIM1-204ENST00000428774 MYSM1Q5VVJ2 828 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
CRIM1-204ENST00000428774 BRAPQ7Z569 592 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 FAM177A1Q8N128 213 aaPredicted RBP12.47□□□□□ -0.41
CRIM1-204ENST00000428774 SLC10A4Q96EP9 437 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 FTOQ9C0B1 505 aaKnown RBP eCLIP12.47□□□□□ -0.41
CRIM1-204ENST00000428774 ZMYND12Q9H0C1 365 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
CRIM1-204ENST00000428774 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 PCDHA4Q9UN74 947 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 ATP6V1DQ9Y5K8 247 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 MYH7BA7E2Y1 1941 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 LCTP09848 1927 aa12.47□□□□□ -0.41
CRIM1-204ENST00000428774 ZNF536O15090 1300 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 FIBPO43427 364 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 FLOT1O75955 427 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 CALML3P27482 149 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 MCM4P33991 863 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 VEGFBP49765 207 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 MOGSQ13724 837 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
CRIM1-204ENST00000428774 DEFB115Q30KQ5 88 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 TREML2Q5T2D2 321 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 CCDC174Q6PII3 467 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 GADL1Q6ZQY3 521 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 NOSTRINQ8IVI9 506 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 BLIDQ8IZY5 108 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 RASGRP4Q8TDF6 673 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 CCDC12Q8WUD4 166 aaPredicted RBP12.46□□□□□ -0.41
CRIM1-204ENST00000428774 ATG4CQ96DT6 458 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 CAPNS2Q96L46 248 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 USP28Q96RU2 1077 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 AMNQ9BXJ7 453 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 GDPD2Q9HCC8 539 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 BRMS1Q9HCU9 246 aa12.46□□□□□ -0.41
CRIM1-204ENST00000428774 SMCO2A6NFE2 343 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 CXCL11O14625 94 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
CRIM1-204ENST00000428774 ADCY7P51828 1080 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 KRT85P78386 507 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 USH1GQ495M9 461 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 SPRYD7Q5W111 196 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 CATSPERGQ6ZRH7 1159 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 FBXO11Q86XK2 927 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 PROCA1Q8NCQ7 364 aaPredicted RBP12.45□□□□□ -0.42
CRIM1-204ENST00000428774 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 PCDHA1Q9Y5I3 950 aa12.45□□□□□ -0.42
CRIM1-204ENST00000428774 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 OPLAHO14841 1288 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 DSG3P32926 999 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 GALNT17Q6IS24 598 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 PRPF38AQ8NAV1 312 aaKnown RBP12.44□□□□□ -0.42
CRIM1-204ENST00000428774 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 HHIPL1Q96JK4 782 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms